BALL::TriangulatedSES Class Reference

#include <BALL/STRUCTURE/triangulatedSES.h>

Inheritance diagram for BALL::TriangulatedSES:

Public Member Functions
Constructors and Destructors
	TriangulatedSES ()
	TriangulatedSES (const TriangulatedSES &surface, bool=true)
	TriangulatedSES (SolventExcludedSurface *ses, const double &density)
virtual	~TriangulatedSES ()
Assignment
void	set (const TriangulatedSES &surface, bool=true)
TriangulatedSES &	operator= (const TriangulatedSES &surface)
void	setDensity (const double &density)
double	getDensity () const
Public Member Functions inherited from BALL::TriangulatedSurface
	TriangulatedSurface ()
	TriangulatedSurface (const TriangulatedSurface &surface, bool=true)
virtual	~TriangulatedSurface ()
void	clear ()
void	set (const TriangulatedSurface &surface, bool=true)
TriangulatedSurface &	operator= (const TriangulatedSurface &surface)
void	insert (TrianglePoint *point)
void	insert (TriangleEdge *edge)
void	insert (Triangle *triangle)
BALL_DEPRECATED Size	numberOfPoints () const
Size	getNumberOfPoints () const
BALL_DEPRECATED Size	numberOfEdges () const
Size	getNumberOfEdges () const
BALL_DEPRECATED Size	numberOfTriangles () const
Size	getNumberOfTriangles () const
void	remove (TrianglePoint *point, bool deep=true)
void	remove (PointIterator p, bool deep=true)
void	remove (TriangleEdge *edge, bool deep=true)
void	remove (EdgeIterator e, bool deep=true)
void	remove (Triangle *triangle, bool deep=true)
void	remove (TriangleIterator t, bool deep=true)
void	exportSurface (Surface &surface)
TriangulatedSurface &	operator+= (const TriangulatedSurface &surface)
void	join (TriangulatedSurface &source)
void	shift (const TVector3< double > &c)
void	blowUp (const double &r)
void	setIndices ()
void	setDensity (const double &density)
double	getDensity () const
void	cut (const TPlane3< double > &plane, const double &fuzzy=0)
void	shrink ()
void	deleteIsolatedEdges ()
void	deleteIsolatedPoints ()
void	getBorder (std::list< TriangleEdge *> &border)
PointIterator	beginPoint ()
ConstPointIterator	beginPoint () const
PointIterator	endPoint ()
ConstPointIterator	endPoint () const
EdgeIterator	beginEdge ()
ConstEdgeIterator	beginEdge () const
EdgeIterator	endEdge ()
ConstEdgeIterator	endEdge () const
TriangleIterator	beginTriangle ()
ConstTriangleIterator	beginTriangle () const
TriangleIterator	endTriangle ()
ConstTriangleIterator	endTriangle () const

Friends
Class friends
class SESTriangulator
class	SESTriangulator

Accessors
SolventExcludedSurface *	ses_
double	density_
void	compute () throw (Exception::GeneralException,Exception::DivisionByZero)

Additional Inherited Members
Public Types inherited from BALL::TriangulatedSurface
typedef std::list< TrianglePoint * >::iterator	PointIterator
typedef std::list< TrianglePoint * >::const_iterator	ConstPointIterator
typedef std::list< TriangleEdge * >::iterator	EdgeIterator
typedef std::list< TriangleEdge * >::const_iterator	ConstEdgeIterator
typedef std::list< Triangle * >::iterator	TriangleIterator
typedef std::list< Triangle * >::const_iterator	ConstTriangleIterator
Static Public Member Functions inherited from BALL::TriangulatedSurface
static TriangulatedSurface *	createTube (unsigned int num_vertices, unsigned int subdiv=0, bool closed=false, bool out=true)
static TriangulatedSurface *	createDisk (unsigned int num_vertices, bool out=true)
Protected Member Functions inherited from BALL::TriangulatedSurface
bool	canBeCopied () const
void	copy (const TriangulatedSurface &surface)
Protected Attributes inherited from BALL::TriangulatedSurface
Size	number_of_points_
std::list< TrianglePoint * >	points_
Size	number_of_edges_
std::list< TriangleEdge * >	edges_
Size	number_of_triangles_
std::list< Triangle * >	triangles_
double	density_

Detailed Description

Generic TriangulatedSES Class.

Definition at line 54 of file triangulatedSES.h.

Constructor & Destructor Documentation

TriangulatedSES() [1/3]

BALL::TriangulatedSES::TriangulatedSES

(

)

Default constructor. This method creates a new TriangulatedSES object.

TriangulatedSES() [2/3]

BALL::TriangulatedSES::TriangulatedSES	(	const TriangulatedSES &	surface,
		bool	= true
	)

Copy constructor. Create a new TriangulatedSES object from another.

Parameters

surface	the TriangulatedSES object to be copied
bool	ignored - just for interface consistency

TriangulatedSES() [3/3]

BALL::TriangulatedSES::TriangulatedSES	(	SolventExcludedSurface *	ses,
		const double &	density
	)

Detailed constructor. Create a new empty TriangulatedSES object and set its SES.

Parameters

ses	a pointer to the corresponding SES
density	the density to use by triangulation

~TriangulatedSES()

virtual BALL::TriangulatedSES::~TriangulatedSES ( )

virtual

Destructor. Destructs the TriangulatedSES object.

Member Function Documentation

compute()

void BALL::TriangulatedSES::compute	(		)
throw	(	Exception::GeneralException,
		Exception::DivisionByZero
	)

getDensity()

double BALL::TriangulatedSES::getDensity

(

)

const

Get the density used by triangulation.

operator=()

TriangulatedSES& BALL::TriangulatedSES::operator=

(

const TriangulatedSES &

surface

)

Assign from another TriangulatedSES.

Parameters

surface

the TriangulatedSES object to assign from

set()

void BALL::TriangulatedSES::set	(	const TriangulatedSES &	surface,
		bool	= true
	)

Assign from another TriangulatedSES.

Parameters

surface	the TriangulatedSES object to assign from
bool	ignored - just for interface consistency

setDensity()

void BALL::TriangulatedSES::setDensity

(

const double &

density

)

Set the density used by triangulation.

Friends And Related Function Documentation

SESTriangulator

friend class SESTriangulator

friend

Definition at line 64 of file triangulatedSES.h.

Member Data Documentation

density_

double BALL::TriangulatedSES::density_

protected

Definition at line 147 of file triangulatedSES.h.

ses_

SolventExcludedSurface* BALL::TriangulatedSES::ses_

protected

Definition at line 145 of file triangulatedSES.h.