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BALL
1.5.0
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This is the complete list of members for BALL::CommandlineParser, including all inherited members.
| CommandlineParser(String tool_name, String tool_description, String tool_version, String build_date, String category="") | BALL::CommandlineParser | |
| copyAdvancedParametersToOptions(Options &options) | BALL::CommandlineParser | |
| EMTPY_LIST | BALL::CommandlineParser | static |
| get(String name) | BALL::CommandlineParser | |
| getList(String name) | BALL::CommandlineParser | |
| getStartCommand() | BALL::CommandlineParser | |
| getStartTime() | BALL::CommandlineParser | |
| has(String name) | BALL::CommandlineParser | |
| NOT_FOUND | BALL::CommandlineParser | static |
| parse(int argc, char *argv[]) | BALL::CommandlineParser | |
| printHelp(const std::set< String > ¶meter_names=std::set< String >(), bool show_manual=true) | BALL::CommandlineParser | |
| printToolInfo() | BALL::CommandlineParser | |
| registerAdvancedParameters(Options &options) | BALL::CommandlineParser | |
| registerFlag(String name, String description, bool default_gui_value=false, bool hidden=false) | BALL::CommandlineParser | |
| registerMandatoryDoubleListParameter(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryDoubleParameter(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryGalaxyOutputFolder(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryGalaxyOutputId(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryInputFile(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryInputFileList(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryIntegerListParameter(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryIntegerParameter(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryOutputFile(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryOutputFileList(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryStringListParameter(const String &name, const String &description) | BALL::CommandlineParser | |
| registerMandatoryStringParameter(const String &name, const String &description) | BALL::CommandlineParser | |
| registerOptionalDoubleListParameter(const String &name, const String &description, const std::vector< double > &default_values=vector< double >()) | BALL::CommandlineParser | |
| registerOptionalDoubleParameter(const String &name, const String &description, double default_value=0.0) | BALL::CommandlineParser | |
| registerOptionalGalaxyOutputFolder(const String &name, const String &description, const String &default_value="") | BALL::CommandlineParser | |
| registerOptionalGalaxyOutputId(const String &name, const String &description, const String &default_value="") | BALL::CommandlineParser | |
| registerOptionalInputFile(const String &name, const String &description, const String &default_value="") | BALL::CommandlineParser | |
| registerOptionalInputFileList(const String &name, const String &description, const std::vector< String > &default_values=vector< String >()) | BALL::CommandlineParser | |
| registerOptionalIntegerListParameter(const String &name, const String &description, const std::vector< int > &default_values=vector< int >()) | BALL::CommandlineParser | |
| registerOptionalIntegerParameter(const String &name, const String &description, int default_value=0) | BALL::CommandlineParser | |
| registerOptionalOutputFile(const String &name, const String &description, const String &default_value="") | BALL::CommandlineParser | |
| registerOptionalOutputFileList(const String &name, const String &description, const std::vector< String > &default_values=vector< String >()) | BALL::CommandlineParser | |
| registerOptionalStringListParameter(const String &name, const String &description, const std::vector< String > &default_values=vector< String >()) | BALL::CommandlineParser | |
| registerOptionalStringParameter(const String &name, const String &description, const String &default_value="") | BALL::CommandlineParser | |
| setParameterAsAdvanced(String name) | BALL::CommandlineParser | |
| setParameterAsHidden(String name) | BALL::CommandlineParser | |
| setParameterRestrictions(String category, String par_name, double min_value, double max_value) | BALL::CommandlineParser | |
| setParameterRestrictions(String par_name, double min_value, double max_value) | BALL::CommandlineParser | |
| setParameterRestrictions(String category, String par_name, int min_value, int max_value) | BALL::CommandlineParser | |
| setParameterRestrictions(String par_name, int min_value, int max_value) | BALL::CommandlineParser | |
| setParameterRestrictions(String category, String par_name, list< String > &allowed_values) | BALL::CommandlineParser | |
| setParameterRestrictions(String par_name, list< String > &allowed_values) | BALL::CommandlineParser | |
| setSupportedFormats(String category, String par_name, String supported_formats) | BALL::CommandlineParser | |
| setSupportedFormats(String par_name, String supported_formats) | BALL::CommandlineParser | |
| setToolManual(const String &manual) | BALL::CommandlineParser |
1.9.1