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IsoSpec 2.2.1
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IsoSpec 2.2.1
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This is the complete list of members for IsoSpec::IsoThresholdGenerator, including all inherited members.
| addElement(int atomCount, int noIsotopes, const double *isotopeMasses, const double *isotopeProbabilities) | IsoSpec::Iso | |
| advanceToNextConfiguration() override final | IsoSpec::IsoThresholdGenerator | inlinevirtual |
| allDim | IsoSpec::Iso | protected |
| atomCounts | IsoSpec::Iso | protected |
| confSize | IsoSpec::Iso | protected |
| count_confs() | IsoSpec::IsoThresholdGenerator | |
| dimNumber | IsoSpec::Iso | protected |
| doMarginalsNeedSorting() const (defined in IsoSpec::Iso) | IsoSpec::Iso | protected |
| FromFASTA(const char *fasta, bool use_nominal_masses=false, bool add_water=true) | IsoSpec::Iso | static |
| FromFASTA(const std::string &fasta, bool use_nominal_masses=false, bool add_water=true) | IsoSpec::Iso | inlinestatic |
| get_conf_signature(int *space) const override final | IsoSpec::IsoThresholdGenerator | inlinevirtual |
| getAllDim() const | IsoSpec::Iso | inline |
| getDimNumber() const | IsoSpec::Iso | inline |
| getHeaviestPeakMass() const | IsoSpec::Iso | |
| getLightestPeakMass() const | IsoSpec::Iso | |
| getModeLProb() const | IsoSpec::Iso | |
| getModeMass() const | IsoSpec::Iso | |
| getMonoisotopicPeakMass() const | IsoSpec::Iso | |
| getTheoreticalAverageMass() const | IsoSpec::Iso | |
| getUnlikeliestPeakLProb() const | IsoSpec::Iso | |
| Iso() (defined in IsoSpec::Iso) | IsoSpec::Iso | |
| Iso(int _dimNumber, const int *_isotopeNumbers, const int *_atomCounts, const double *_isotopeMasses, const double *_isotopeProbabilities) | IsoSpec::Iso | |
| Iso(int _dimNumber, const int *_isotopeNumbers, const int *_atomCounts, const double *const *_isotopeMasses, const double *const *_isotopeProbabilities) (defined in IsoSpec::Iso) | IsoSpec::Iso | |
| Iso(const char *formula, bool use_nominal_masses=false) | IsoSpec::Iso | |
| Iso(const std::string &formula, bool use_nominal_masses=false) | IsoSpec::Iso | inline |
| Iso(Iso &&other) | IsoSpec::Iso | |
| Iso(const Iso &other, bool fullcopy) | IsoSpec::Iso | |
| IsoGenerator(Iso &&iso, bool alloc_partials=true) | IsoSpec::IsoGenerator | |
| IsoThresholdGenerator(const IsoThresholdGenerator &other)=delete (defined in IsoSpec::IsoThresholdGenerator) | IsoSpec::IsoThresholdGenerator | |
| IsoThresholdGenerator(Iso &&iso, double _threshold, bool _absolute=true, int _tabSize=1000, int _hashSize=1000, bool reorder_marginals=true) | IsoSpec::IsoThresholdGenerator | |
| isotopeNumbers | IsoSpec::Iso | protected |
| lprob() const override final | IsoSpec::IsoThresholdGenerator | inlinevirtual |
| marginals | IsoSpec::Iso | protected |
| mass() const override final | IsoSpec::IsoThresholdGenerator | inlinevirtual |
| mode_lprob (defined in IsoSpec::IsoGenerator) | IsoSpec::IsoGenerator | |
| operator=(const IsoThresholdGenerator &other)=delete (defined in IsoSpec::IsoThresholdGenerator) | IsoSpec::IsoThresholdGenerator | |
| operator=(const Iso &other)=delete (defined in IsoSpec::Iso) | IsoSpec::Iso | |
| partialLProbs | IsoSpec::IsoGenerator | protected |
| partialMasses | IsoSpec::IsoGenerator | protected |
| partialProbs | IsoSpec::IsoGenerator | protected |
| prob() const override final | IsoSpec::IsoThresholdGenerator | inlinevirtual |
| reset() | IsoSpec::IsoThresholdGenerator | |
| saveMarginalLogSizeEstimates(double *priorities, double target_total_prob) const | IsoSpec::Iso | |
| stddev() const | IsoSpec::Iso | inline |
| terminate_search() | IsoSpec::IsoThresholdGenerator | |
| variance() const | IsoSpec::Iso | |
| ~Iso() | IsoSpec::Iso | virtual |
| ~IsoGenerator() | IsoSpec::IsoGenerator | virtual |
| ~IsoThresholdGenerator() (defined in IsoSpec::IsoThresholdGenerator) | IsoSpec::IsoThresholdGenerator |
1.9.8