Class HDFLibrary
- java.lang.Object
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- ncsa.hdf.hdflib.HDFLibrary
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- All Implemented Interfaces:
java.io.Serializable
- Direct Known Subclasses:
HDFDeprecated
public class HDFLibrary extends java.lang.Object implements java.io.SerializableThis is the Java interface for the HDF 4.1 library.This code is the called by Java programs to access the entry points of the HDF 4.2 library. Each routine wraps a single HDF entry point, generally with the arguments and return codes analogous to the C interface.
For details of the HDF libraries, see the HDF Documentation at: http://hdf.ncsa.uiuc.edu
These routines use the class HDFArray to handle arrays of arbitrary type and shape.
Mapping of arguments for Java
In general, arguments to the HDF Java API are straightforward translations from the 'C' API described in the HDF Reference Manual.
C types to Java types C Java int, intn, int32, uint32 int short, uint16, int16 short float, float32 float double, float64 double char, uchar, int8, uint8 byte char * (i.e., string) java.lang.String void void void *, VOIDP, char * (meaning ``any'') Special -- see HDFArray General Rules for Passing Arguments and Results In general, arguments passed IN to Java are the analogous basic types, as above. The exception is for arrays, which are discussed below.
The return value of Java methods is also the analogous type, as above. A major exception to that rule is that all HDF functions that return SUCCEED/FAIL are declared boolean in the Java version, rather than intn or whatever. (Functions that return a value or else FAIL are declared the equivalent to the C function.)
Java does not support pass by reference of arguments, so arguments that are returned through OUT parameters must be wrapped in an object or array. The Java API for HDF consistently wraps arguments in arrays.
For instance, a function that returns two integers is declared:
void HDFdummy( int32* a1, int32* a2)For the Java interface, this would be declared:public static native void HDFdummy( int args[] );where a1 is args[0] and a2 is args[1].All the routines where this convention is used will have specific documentation of the details, given below.
Arrays
HDF needs to read and write multi-dimensional arrays of many types. The HDF API is self-describing, with the data for the array passed as a block of bytes, for instance,
int SDreaddata(int sdsid, int32 *start, int32 * stride, int32 *count, VOIDP data);where ``VOIDP'' means that the data may be any valid numeric type, and is a contiguous block of bytes that is the data for a multi-dimensional array.
For Java, this is a problem, as the type of data must be declared. Furthermore, multidimensional arrays are definitely not layed out contiguously in memory. It would be infeasible to declare a separate routine for every combination of number type and dimensionality. For that reason, the HDFArray class is used to discover the type, shape, and size of the data array at run time, and to convert to and from contigous bytes. The upshot is that the data can be passed as an ``Object'', and the Java API will translate to and from the appropriate bytes. So the function above would be declared:
int SDreaddata(int sdsid, int[] start, int[] stride, int[] count, Object data);and the parameter data can be any multi-dimensional array of numbers, such as float[][], or int[][][].Compression and Chunk Information The HDF library passes the parameters needed by compression and chunking through C structures (actually, unions). The Java interface passes these as instances of subclasses of class HDFCompInfo and HDFChunkInfo respectively.
See: ncsa.hdf.hdflib.HDFChunkInfo, and
- See Also:
- Serialized Form
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Field Summary
Fields Modifier and Type Field Description static java.lang.StringHDFPATH_PROPERTY_KEY
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Constructor Summary
Constructors Constructor Description HDFLibrary()
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Method Summary
All Methods Static Methods Concrete Methods Deprecated Methods Modifier and Type Method Description static intANannlen(int ann_id)static intANannlist(int an_id, int anntype, int tag, int ref, int[] ann_list)static shortANatype2tag(int antag)static intANcreate(int an_id, short tag, short ref, int type)static intANcreatef(int an_id, int type)static booleanANend(int an_id)static booleanANendaccess(int an_id)static booleanANfileinfo(int an_id, int[] info)static intANget_tagref(int an_id, int index, int type, short[] tagref)static booleanANid2tagref(int an_id, short[] tagref)static intANnumann(int an_id, int anntype, short tag, short ref)static booleanANreadann(int ann_id, java.lang.String[] annbuf, int maxlen)static intANselect(int an_id, int index, int anntype)static intANstart(int fid)static intANtag2atype(short anttype)static intANtagref2id(int an_id, short tag, short ref)static booleanANwriteann(int ann_id, java.lang.String label, int ann_length)static booleanDF24addimage(java.lang.String filename, byte[] image, int width, int height)static booleanDF24addimage(java.lang.String filename, java.lang.Object theImage, int width, int height)static booleanDF24getdims(java.lang.String fileName, int[] argv)static booleanDF24getimage(java.lang.String fileName, byte[] imagedata, int width, int height)static booleanDF24getimage(java.lang.String fileName, java.lang.Object theImagedata, int width, int height)static shortDF24lastref()static intDF24nimages(java.lang.String fileName)static booleanDF24putimage(java.lang.String filename, byte[] image, int width, int height)static booleanDF24putimage(java.lang.String filename, java.lang.Object theImage, int width, int height)static booleanDF24readref(java.lang.String filename, int ref)static booleanDF24reqil(int il)static booleanDF24restart()static booleanDF24setcompress(int type, HDFCompInfo cinfo)static booleanDF24setdims(int width, int height)static booleanDF24setil(int il)static intDFKNTsize(int numbertype)static booleanDFPaddpal(java.lang.String filename, byte[] palette)static booleanDFPgetpal(java.lang.String filename, byte[] palette)static shortDFPlastref()static intDFPnpals(java.lang.String filename)static booleanDFPputpal(java.lang.String filename, byte[] palette, boolean overwrite, java.lang.String filemode)static booleanDFPputpal(java.lang.String filename, byte[] palette, int overwrite, java.lang.String filemode)static booleanDFPreadref(java.lang.String filename, short ref)static shortDFPrestart()static booleanDFPwriteref(java.lang.String filename, short ref)static booleanDFR8addimage(java.lang.String filename, byte[] image, int width, int height, short compress)static booleanDFR8addimage(java.lang.String filename, java.lang.Object theImage, int width, int height, short compress)static booleanDFR8getdims(java.lang.String fileName, int[] argv, boolean[] haspalette)static booleanDFR8getimage(java.lang.String fileName, byte[] imagedata, int width, int height, byte[] palette)static booleanDFR8getimage(java.lang.String fileName, java.lang.Object theImagedata, int width, int height, byte[] palette)static booleanDFR8getpalref(short[] palref)static shortDFR8lastref()static intDFR8nimages(java.lang.String fileName)static booleanDFR8putimage(java.lang.String filename, byte[] image, int width, int height, short compress)static booleanDFR8putimage(java.lang.String filename, java.lang.Object theImage, int width, int height, short compress)static booleanDFR8readref(java.lang.String filename, int ref)static booleanDFR8restart()static booleanDFR8setcompress(int type, HDFCompInfo cinfo)static booleanDFR8setpalette(byte[] palette)static booleanDFR8writeref(java.lang.String filename, short ref)static java.lang.StringgetJHIVersion()Deprecated.static booleanGRattrinfo(int id, int index, java.lang.String[] name, int[] argv)static intGRcreate(int gr_id, java.lang.String name, int ncomp, int data_type, int interlace_mode, int[] dim_sizes)static booleanGRend(int grid)static booleanGRendaccess(int riid)static booleanGRfileinfo(int grid, int[] args)static intGRfindattr(int id, java.lang.String name)static booleanGRgetattr(int id, int index, byte[] data)static booleanGRgetattr(int id, int index, java.lang.Object theData)static booleanGRgetchunkinfo(int sdsid, HDFChunkInfo chunk_def, int[] flag)static booleanGRgetcompress(int ri_id, HDFCompInfo c_info)static booleanGRgetiminfo(int grid, java.lang.String[] gr_name, int[] args, int[] dim_sizes)static intGRgetlutid(int rrid, int index)static booleanGRgetlutinfo(int lutid, int[] args)static intGRgetnluts(int rrid)static shortGRidtoref(int riid)static shortGRluttoref(int pal_id)static intGRnametoindex(int grid, java.lang.String name)static booleanGRreadchunk(int sdsid, int[] origin, byte[] theData)static booleanGRreadchunk(int grid, int[] origin, java.lang.Object theData)static booleanGRreadimage(int grid, int[] start, int[] stride, int[] count, byte[] data)static booleanGRreadimage(int grid, int[] start, int[] stride, int[] count, java.lang.Object theData)static booleanGRreadlut(int lutid, byte[] data)static booleanGRreadlut(int lutid, java.lang.Object theData)static intGRreftoindex(int grid, short ref)static booleanGRreqimageil(int rrid, int interlace)static booleanGRreqlutil(int riid, int interlace)static intGRselect(int grid, int index)static booleanGRsetattr(int gr_id, java.lang.String attr_name, int data_type, int count, byte[] values)static booleanGRsetattr(int gr_id, java.lang.String attr_name, int data_type, int count, java.lang.Object theData)static booleanGRsetattr(int gr_id, java.lang.String attr_name, int data_type, int count, java.lang.String values)static booleanGRsetchunk(int sdsid, HDFChunkInfo chunk_def, int flags)static intGRsetchunkcache(int sdsid, int maxcache, int flags)static booleanGRsetcompress(int ri_id, int comp_type, HDFCompInfo c_info)static booleanGRsetexternalfile(int ri_id, java.lang.String filename, int offset)static intGRstart(int fid)static booleanGRwriteimage(int grid, int[] start, int[] stride, int[] edge, byte[] data)static booleanGRwriteimage(int grid, int[] start, int[] stride, int[] edge, java.lang.Object theData)static booleanGRwritelut(int pal_id, int ncomp, int data_type, int interlace, int num_entries, byte[] pal_data)static booleanGRwritelut(int pal_id, int ncomp, int data_type, int interlace, int num_entries, java.lang.Object theData)static booleanHcache(int file_id, int cache_switch)static intHCget_config_info(int coder_type)New API for hdf-42r1static booleanHclose(int fid)static intHDdont_atexit()static booleanHDFclose(int file_id)static intHDFopen(java.lang.String filename, int access, short n_dds)static java.lang.StringHDgetNTdesc(int nt)static java.lang.StringHEstring(int error_code)static shortHEvalue(int level)static booleanHgetfileversion(int file_id, int[] vers, java.lang.String[] string)Note: the version of an HDF file is not well defined, it is not recommended that programs rely on these numbers.static booleanHgetlibversion(int[] vers, java.lang.String[] string)static booleanHishdf(java.lang.String fileName)static intHnumber(int fid)static intHopen(java.lang.String filename)static intHopen(java.lang.String filename, int access)static booleanHsetaccesstype(int h_id, int access_type)static booleanHsync(int file_id)static booleanHXsetcreatedir(java.lang.String dir)static booleanHXsetdir(java.lang.String dir)static voidloadH4Lib()static booleanSDattrinfo(int id, int index, java.lang.String[] name, int[] argv)static booleanSDcheckempty(int sdsid, int[] emptySDS)static intSDcreate(int sd_id, java.lang.String name, int number_type, int rank, int[] dimsizes)static booleanSDdiminfo(int dimid, java.lang.String[] name, int[] argv)static booleanSDend(int sdid)static booleanSDendaccess(int sdsid)static booleanSDfileinfo(int sdid, int[] argv)static intSDfindattr(int id, java.lang.String name)static booleanSDgetcal(int sdsid, double[] argv, int[] NT)static booleanSDgetchunkinfo(int sdsid, HDFChunkInfo chunk_def, int[] clflags)static booleanSDgetcompinfo(int id, HDFCompInfo cinfo)static booleanSDgetcompress(int id, HDFCompInfo cinfo)Deprecated.As of HDF 4.2.9, replaced bySDgetcompinfo(int, HDFCompInfo)static booleanSDgetdatastrs(int sdsid, java.lang.String[] strings, int len)static intSDgetdimid(int sdsid, int index)static booleanSDgetdimscale(int dimid, byte[] data)static booleanSDgetdimscale(int dimid, java.lang.Object theData)static booleanSDgetdimstrs(int dimid, java.lang.String[] args, int len)static booleanSDgetfillvalue(int sdsid, byte[] fillValue)static booleanSDgetfillvalue(int sdsid, java.lang.Object[] theFillValue)static booleanSDgetinfo(int sdsid, java.lang.String[] name, int[] dimsizes, int[] args)static booleanSDgetrange(int sdsid, byte[] max, byte[] min)static booleanSDgetrange(int sdsid, double[] maxmin)static intSDidtoref(int sdsid)static booleanSDiscoordvar(int sdsid)static booleanSDisdimval_bwcomp(int dimid)static booleanSDisrecord(int sdsid)static intSDnametoindex(int sdid, java.lang.String name)static booleanSDreadattr(int id, int index, byte[] data)static booleanSDreadattr(int id, int index, java.lang.Object theData)static booleanSDreadchunk(int sdsid, int[] origin, byte[] theData)static booleanSDreadchunk(int sdsid, int[] origin, java.lang.Object theData)static booleanSDreaddata(int sdsid, int[] start, int[] stride, int[] count, byte[] data)static booleanSDreaddata(int sdsid, int[] start, int[] stride, int[] count, java.lang.Object theData)static booleanSDreaddata_double(int sdsid, int[] start, int[] stride, int[] count, double[] theData)static booleanSDreaddata_float(int sdsid, int[] start, int[] stride, int[] count, float[] theData)static booleanSDreaddata_int(int sdsid, int[] start, int[] stride, int[] count, int[] theData)static booleanSDreaddata_long(int sdsid, int[] start, int[] stride, int[] count, long[] theData)static booleanSDreaddata_short(int sdsid, int[] start, int[] stride, int[] count, short[] theData)static intSDreftoindex(int sdid, int ref)static intSDselect(int sdid, int index)static booleanSDsetaccesstype(int id, int accesstype)static booleanSDsetattr(int s_id, java.lang.String attr_name, int num_type, int count, byte[] values)static booleanSDsetattr(int s_id, java.lang.String attr_name, int num_type, int count, java.lang.Object theValues)static booleanSDsetblocksize(int sdsid, int block_size)static booleanSDsetcal(int sds_id, double cal, double cal_err, double offset, double offset_err, int number_type)static booleanSDsetchunk(int sdsid, HDFChunkInfo chunk_def, int flags)static intSDsetchunkcache(int sdsid, int maxcache, int flags)static booleanSDsetcompress(int id, int type, HDFCompInfo cinfo)static booleanSDsetdatastrs(int sds_id, java.lang.String label, java.lang.String unit, java.lang.String format, java.lang.String coordsys)static booleanSDsetdimname(int dim_id, java.lang.String dim_name)static booleanSDsetdimscale(int dim_id, int count, int number_type, byte[] data)static booleanSDsetdimscale(int dim_id, int count, int number_type, java.lang.Object theData)static booleanSDsetdimstrs(int dim_id, java.lang.String label, java.lang.String unit, java.lang.String format)static booleanSDsetdimval_comp(int dimid, int comp_mode)static booleanSDsetexternalfile(int sds_id, java.lang.String filename, int offset)static booleanSDsetfillmode(int sdsid, boolean fill_enable)static booleanSDsetfillmode(int sdsid, int fillmode)static booleanSDsetfillvalue(int sds_id, byte[] fill_val)static booleanSDsetfillvalue(int sds_id, java.lang.Object the_fill_val)static booleanSDsetnbitdataset(int id, int start_bit, int bit_len, int sign_ext, int fill_one)static booleanSDsetrange(int sdsid, byte[] max, byte[] min)static booleanSDsetrange(int sdsid, java.lang.Object max, java.lang.Object min)static intSDstart(java.lang.String filename, int accessmode)static booleanSDwritechunk(int sdsid, int[] origin, byte[] data)static booleanSDwritechunk(int sdsid, int[] origin, java.lang.Object theData)static booleanSDwritedata(int sdsid, int[] start, int[] stride, int[] count, byte[] data)static booleanSDwritedata(int sdsid, int[] start, int[] stride, int[] count, java.lang.Object theData)static intVaddtagref(int vgroup_id, int tag, int ref)static intVattach(int fid, int vgroup_ref, java.lang.String access)static booleanVattrinfo(int id, int index, java.lang.String[] name, int[] argv)static intVdeletetagref(int vgroup_id, int tag, int ref)static voidVdetach(int vgroup_id)static voidVend(int file_id)static intVFfieldesize(int vdata_id, int field_index)static intVFfieldisize(int vdata_id, int field_index)static java.lang.StringVFfieldname(int vdata_id, int field_index)static intVFfieldorder(int vdata_id, int field_index)static intVFfieldtype(int vdata_id, int field_index)static intVfind(int file_id, java.lang.String vgroup_name)static intVfindattr(int id, java.lang.String name)static intVfindclass(int file_id, java.lang.String vgclassname)static intVflocate(int key, java.lang.String vgclassname)static intVFnfields(int vkey)static booleanVgetattr(int id, int index, byte[] data)static booleanVgetattr(int id, int index, java.lang.Object theData)static voidVgetclass(int vgroup_id, java.lang.String[] hdfclassname)static intVgetid(int file_id, int vgroup_ref)static voidVgetname(int vgroup_id, java.lang.String[] hdfname)static intVgetnext(int key, int ref)static booleanVgettagref(int vgroup_id, int index, int[] tagref)static intVgettagrefs(int vgroup_id, int[] tags, int[] refs, int arraysize)static intVgetversion(int id)static intVHmakegroup(int file_id, int[] tag_array, int[] ref_array, int n_objects, java.lang.String vgroup_name, java.lang.String vgroup_class)static intVHstoredata(int file_id, java.lang.String fieldname, byte[] buf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class)static intVHstoredata(int file_id, java.lang.String fieldname, java.lang.Object thebuf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class)static intVHstoredatam(int file_id, java.lang.String fieldname, byte[] buf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class, int order)static intVHstoredatam(int file_id, java.lang.String fieldname, java.lang.Object buf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class, int order)static booleanVinqtagref(int vgroup_id, int tag, int ref)static booleanVinquire(int vgroup_id, int[] n_entries, java.lang.String[] vgroup_name)static intVinsert(int vgroup_id, int v_id)static booleanVisvg(int vgroup_id, int vgroup_ref)static booleanVisvs(int vgroup_id, int vdata_ref)static intVlone(int fid, int[] ref_array, int buffersize)static intVnattrs(int id)static intVnrefs(int key, int ref)static intVntagrefs(int vgroup_id)static intVQueryref(int vkey)static intVQuerytag(int vkey)static booleanVSappendable(int vkey, int block_size)static intVSattach(int fid, int vdata_ref, java.lang.String access)static booleanVSattrinfo(int id, int index, int attr_index, java.lang.String[] name, int[] argv)static voidVSdetach(int vdata_id)static intVSelts(int vdata_id)static booleanVsetattr(int id, java.lang.String attr_name, int data_type, int count, byte[] data)static booleanVsetattr(int id, java.lang.String attr_name, int data_type, int count, java.lang.Object theData)static booleanVsetattr(int id, java.lang.String attr_name, int data_type, int count, java.lang.String values)static booleanVsetclass(int vgroup_id, java.lang.String vgclassname)static booleanVsetname(int vgroup_id, java.lang.String vgname)static booleanVSfdefine(int vdata_id, java.lang.String fieldname, int numbertype, int order)static booleanVSfexist(int vdata_id, java.lang.String fields)static intVSfind(int file_id, java.lang.String vdataname)static intVSfindattr(int id, int index, java.lang.String name)static intVSfindclass(int file_id, java.lang.String vgclass)static intVSfindex(int id, java.lang.String name, int[] findex)static intVSfnattrs(int id, int fnattrs)static booleanVSgetattr(int id, int index, int attr_index, byte[] data)static booleanVSgetattr(int id, int index, int attr_index, java.lang.Object theData)static voidVSgetclass(int vdata_id, java.lang.String[] hdfclassname)static intVSgetfields(int vdata_id, java.lang.String[] fieldname)static intVSgetid(int file_id, int vdata_ref)static intVSgetinterlace(int vdata_id)static voidVSgetname(int vdata_id, java.lang.String[] hdfname)static intVSgetversion(int vkey)static booleanVSinquire(int vdata_id, int[] iargs)static booleanVSinquire(int vdata_id, int[] iargs, java.lang.String[] sargs)static booleanVSisattr(int id)static intVSlone(int fid, int[] ref_array, int buffersize)static intVSnattrs(int id)static booleanVSQuerycount(int vdata_id, int[] n_records)static booleanVSQueryfields(int vdata_id, java.lang.String[] fields)static booleanVSQueryinterlace(int vdata_id, int[] interlace)static booleanVSQueryname(int vdata_id, java.lang.String[] vdata_name)static intVSQueryref(int vdata_id)static intVSQuerytag(int vdata_id)static booleanVSQueryvsize(int vdata_id, int[] vdata_size)static intVSread(int vdata_id, byte[] databuf, int nrecord, int interlace)static intVSread(int vdata_id, java.lang.Object theData, int nrecord, int interlace)static intVSseek(int vdata_id, int record)static booleanVSsetattr(int id, int index, java.lang.String attr_name, int data_type, int count, byte[] values)static booleanVSsetattr(int id, int index, java.lang.String attr_name, int data_type, int count, java.lang.Object theData)static booleanVSsetattr(int id, int index, java.lang.String attr_name, int data_type, int count, java.lang.String values)static intVSsetblocksize(int vdata_id, int blocksize)static voidVSsetclass(int vdata_id, java.lang.String vdata_class)static booleanVSsetexternalfile(int vkey, java.lang.String filename, int offset)static booleanVSsetfields(int vdata_id, java.lang.String fields)static booleanVSsetinterlace(int vdata_id, int interlace)static voidVSsetname(int vdata_id, java.lang.String vdata_name)static intVSsetnumblocks(int vdata_id, int numblocks)static intVSsizeof(int vdata_id, java.lang.String fields)static booleanVstart(int fid)static intVSwrite(int vdata_id, byte[] databuf, int n_records, int interlace)static intVSwrite(int vdata_id, java.lang.Object databuf, int n_records, int interlace)
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Field Detail
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HDFPATH_PROPERTY_KEY
public static final java.lang.String HDFPATH_PROPERTY_KEY
- See Also:
- Constant Field Values
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Method Detail
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loadH4Lib
public static void loadH4Lib()
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getJHIVersion
@Deprecated public static final java.lang.String getJHIVersion()
Deprecated.
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Hopen
public static int Hopen(java.lang.String filename) throws HDFException- Throws:
HDFException
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Hopen
public static int Hopen(java.lang.String filename, int access) throws HDFException- Throws:
HDFException
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Hclose
public static boolean Hclose(int fid) throws HDFException- Throws:
HDFException
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HDdont_atexit
public static int HDdont_atexit() throws HDFException- Throws:
HDFException
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Hishdf
public static boolean Hishdf(java.lang.String fileName) throws HDFException- Throws:
HDFException
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Hnumber
public static int Hnumber(int fid) throws HDFException- Throws:
HDFException
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DFKNTsize
public static int DFKNTsize(int numbertype) throws HDFException- Throws:
HDFException
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HDgetNTdesc
public static java.lang.String HDgetNTdesc(int nt) throws HDFException- Throws:
HDFException
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Hcache
public static boolean Hcache(int file_id, int cache_switch) throws HDFException- Throws:
HDFException
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Hgetfileversion
public static boolean Hgetfileversion(int file_id, int[] vers, java.lang.String[] string) throws HDFExceptionNote: the version of an HDF file is not well defined, it is not recommended that programs rely on these numbers.- Parameters:
file_id- IN: int, the file descriptor returned by Hopenvers- OUT: int[3], the major version, minor version, and release number of the file.string- OUT: String[1], the version string- Returns:
- the major, minor, and release number are returned in the array of ints, and a string is returned in the string.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Hgetlibversion
public static boolean Hgetlibversion(int[] vers, java.lang.String[] string) throws HDFException- Parameters:
vers- OUT: int[3], the major version, minor version, and release number of the HDF library.string- OUT: String[1], the version string- Returns:
- the major, minor, and release number are returned in the array of ints, and a string is returned in the string.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Hsetaccesstype
public static boolean Hsetaccesstype(int h_id, int access_type) throws HDFException- Throws:
HDFException
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Hsync
public static boolean Hsync(int file_id) throws HDFException- Throws:
HDFException
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ANstart
public static int ANstart(int fid) throws HDFException- Throws:
HDFException
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ANend
public static boolean ANend(int an_id) throws HDFException- Throws:
HDFException
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ANendaccess
public static boolean ANendaccess(int an_id) throws HDFException- Throws:
HDFException
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ANfileinfo
public static boolean ANfileinfo(int an_id, int[] info) throws HDFException- Parameters:
an_id- IN: the AN interface id, returned by ANstartinfo- OUT: int[4], n_file_label, n_file_desc, n_data_label, n_data_desc- Returns:
- four integer parameters: info[0] = n_file_label, info[1] = n_file_desc, info[2] = n_data_label, info[3] = n_data_desc
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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ANselect
public static int ANselect(int an_id, int index, int anntype) throws HDFException- Throws:
HDFException
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ANnumann
public static int ANnumann(int an_id, int anntype, short tag, short ref) throws HDFException- Throws:
HDFException
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ANatype2tag
public static short ANatype2tag(int antag) throws HDFException- Throws:
HDFException
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ANtag2atype
public static int ANtag2atype(short anttype) throws HDFException- Throws:
HDFException
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ANannlist
public static int ANannlist(int an_id, int anntype, int tag, int ref, int[] ann_list) throws HDFException- Parameters:
an_id- IN: the AN interface id, returned by ANstartanntype- IN: the number type, as defined in HDFConstantstag- IN: the HDF tagref- IN: the HDF refann_list- OUT: int[], an array of annotation identifiers. The array must be long enough to hold the number of annotations returned by ANnumann- Returns:
- an array of integers, which are the identifiers of the annotations
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
ANannlen
public static int ANannlen(int ann_id) throws HDFException- Throws:
HDFException
-
ANreadann
public static boolean ANreadann(int ann_id, java.lang.String[] annbuf, int maxlen) throws HDFException- Parameters:
ann_id- IN: the AN interface id, returned by ANstartannbuf- OUT: String[1], the annotation is returned as annbuf[0].maxlen- IN: int, the maximum length of the string.- Returns:
- an annotation string: annbuf[0] = the annotation
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
ANcreate
public static int ANcreate(int an_id, short tag, short ref, int type) throws HDFException- Throws:
HDFException
-
ANcreatef
public static int ANcreatef(int an_id, int type) throws HDFException- Throws:
HDFException
-
ANget_tagref
public static int ANget_tagref(int an_id, int index, int type, short[] tagref) throws HDFException- Parameters:
an_id- IN: the AN interface id, returned by ANstartindex- IN: the index of the annotationtype- IN: the type of the annotationtagref- OUT: short[2], the tag and ref of the annotation- Returns:
- the tag and ref: tagref[0] = tag, tagref[1] = ref
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
ANid2tagref
public static boolean ANid2tagref(int an_id, short[] tagref) throws HDFException- Parameters:
an_id- IN: the AN interface id, returned by ANstarttagref- OUT: short[2], the tag and ref of the annotation- Returns:
- the tag and ref: tagref[0] = tag, tagref[1] = ref
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
ANtagref2id
public static int ANtagref2id(int an_id, short tag, short ref) throws HDFException- Throws:
HDFException
-
ANwriteann
public static boolean ANwriteann(int ann_id, java.lang.String label, int ann_length) throws HDFException- Throws:
HDFException
-
DFPaddpal
public static boolean DFPaddpal(java.lang.String filename, byte[] palette) throws HDFException- Throws:
HDFException
-
DFPgetpal
public static boolean DFPgetpal(java.lang.String filename, byte[] palette) throws HDFException- Throws:
HDFException
-
DFPlastref
public static short DFPlastref() throws HDFException- Throws:
HDFException
-
DFPnpals
public static int DFPnpals(java.lang.String filename) throws HDFException- Throws:
HDFException
-
DFPputpal
public static boolean DFPputpal(java.lang.String filename, byte[] palette, int overwrite, java.lang.String filemode) throws HDFException- Throws:
HDFException
-
DFPputpal
public static boolean DFPputpal(java.lang.String filename, byte[] palette, boolean overwrite, java.lang.String filemode) throws HDFException- Parameters:
filename- IN: String, the name of the HDF filepalette- IN: byte[] the paletteoverwrite- IN: boolean, converted to 1 == true, 0 == false to call the HDF library- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
DFPreadref
public static boolean DFPreadref(java.lang.String filename, short ref) throws HDFException- Throws:
HDFException
-
DFPrestart
public static short DFPrestart() throws HDFException- Throws:
HDFException
-
DFPwriteref
public static boolean DFPwriteref(java.lang.String filename, short ref) throws HDFException- Throws:
HDFException
-
GRstart
public static int GRstart(int fid) throws HDFException- Throws:
HDFException
-
GRend
public static boolean GRend(int grid) throws HDFException- Throws:
HDFException
-
GRfileinfo
public static boolean GRfileinfo(int grid, int[] args) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by GRstartargs- OUT: int[2], n_datasets and n_file_attrs- Returns:
- the file info: args[0] = n_datasets, args[1] = n_file_attrs
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRgetchunkinfo
public static boolean GRgetchunkinfo(int sdsid, HDFChunkInfo chunk_def, int[] flag) throws HDFException- Parameters:
sdsid- IN: the SD identifier returned by SDselectchunk_def- OUT: HDFChunkInfo, the chunking infoflag- OUT: int[1], the type of chunking- Returns:
- c_info contains information about the chunking method,
flags[0] == the chunking flags
NOTE:The chunking algorithm-specific information is passed in an appropriate sub-class of HDFChunkInfo.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRselect
public static int GRselect(int grid, int index) throws HDFException- Throws:
HDFException
-
GRnametoindex
public static int GRnametoindex(int grid, java.lang.String name) throws HDFException- Throws:
HDFException
-
GRgetiminfo
public static boolean GRgetiminfo(int grid, java.lang.String[] gr_name, int[] args, int[] dim_sizes) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by GRstartargs- OUT: int[5], image info: number of components in the image, data type of the image data, interlace mode of the stored image data, sizes of each image dimension , number of attributes assigned to the imagedim_sizes- OUT: int[2], dim_sizes- Returns:
- the file info: String[0] = gr_name, args[0] = ncomp,
args[1] = data_type, args[2] = interlace, args[3] = num_attrs
NOTE: the parameters for the Java interface are not in the same order as the C interface.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRreadimage
public static boolean GRreadimage(int grid, int[] start, int[] stride, int[] count, byte[] data) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by GRstartstart- IN: int[], startstride- IN: int[], stridecount- IN: int[], countdata- OUT: byte[], data- Returns:
- the the data in the form of a continous array of
bytes.
NOTE: to read into a Java 2D array use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRreadimage
public static boolean GRreadimage(int grid, int[] start, int[] stride, int[] count, java.lang.Object theData) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by GRstartstart- IN: int[], startstride- IN: int[], stridecount- IN: int[], counttheData- OUT: Object, a Java array of appropriate type, dimensions, and size.- Returns:
- the the data in the Java array.
Note: reads the data as bytes and converts to the Java array.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRendaccess
public static boolean GRendaccess(int riid) throws HDFException- Throws:
HDFException
-
GRidtoref
public static short GRidtoref(int riid) throws HDFException- Throws:
HDFException
-
GRreftoindex
public static int GRreftoindex(int grid, short ref) throws HDFException- Throws:
HDFException
-
GRreqlutil
public static boolean GRreqlutil(int riid, int interlace) throws HDFException- Throws:
HDFException
-
GRreqimageil
public static boolean GRreqimageil(int rrid, int interlace) throws HDFException- Throws:
HDFException
-
GRgetlutid
public static int GRgetlutid(int rrid, int index) throws HDFException- Throws:
HDFException
-
GRgetnluts
public static int GRgetnluts(int rrid) throws HDFException- Throws:
HDFException
-
GRgetlutinfo
public static boolean GRgetlutinfo(int lutid, int[] args) throws HDFException- Parameters:
lutid- IN: the palette identifier returned by GRgetlutidargs- OUT: int[4], palette info: Number of components in the palette, Data type of the palette data, Interlace mode of the stored palette data, Number of color lookup table entries in the palette.- Returns:
- the palette info: args[0] = ncomp, args[1] = data_type, args[2] = interlace, args[3] = num_entries
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRreadlut
public static boolean GRreadlut(int lutid, byte[] data) throws HDFException- Parameters:
lutid- IN: the palette identifier returned by GRgetlutiddata- OUT: byte[], palette data, in bytes- Returns:
- the palette data: as bytes
NOTE: to read into a Java 1D array use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRreadlut
public static boolean GRreadlut(int lutid, java.lang.Object theData) throws HDFException- Parameters:
lutid- IN: the palette identifier returned by GRgetlutidtheData- OUT: Object, palette data, an Java array- Returns:
- the palette data: as a Java array
Note: reads the data as bytes and converts to the Java array.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRattrinfo
public static boolean GRattrinfo(int id, int index, java.lang.String[] name, int[] argv) throws HDFException- Parameters:
id- IN: the GR identifier returned by GRstartindex- IN: the index of the attributename- OUT: String[1], the name of the attributeargv- OUT: int[2], the type and length of the attribute- Returns:
- the name, type, and lenght of the attribute: name[0] = name, argv[0] = data_type, argv[1] = length
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRgetattr
public static boolean GRgetattr(int id, int index, byte[] data) throws HDFException- Parameters:
id- IN: the GR identifier returned by GRstartdata- OUT: byte[], attribute data, in bytes- Returns:
- the attribute data: as bytes
NOTE: to read into a Java 1D array use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRgetattr
public static boolean GRgetattr(int id, int index, java.lang.Object theData) throws HDFException- Parameters:
id- IN: the GR identifier returned by GRstarttheData- OUT: Object, attribute data, an Java array- Returns:
- the attribute data: as a Java array
Note: reads the data as bytes and converts to the Java array.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
GRfindattr
public static int GRfindattr(int id, java.lang.String name) throws HDFException- Throws:
HDFException
-
GRcreate
public static int GRcreate(int gr_id, java.lang.String name, int ncomp, int data_type, int interlace_mode, int[] dim_sizes) throws HDFException- Throws:
HDFException
-
GRluttoref
public static short GRluttoref(int pal_id) throws HDFException- Throws:
HDFException
-
GRsetattr
public static boolean GRsetattr(int gr_id, java.lang.String attr_name, int data_type, int count, java.lang.String values) throws HDFException- Parameters:
gr_id- IN: the GR identifier returned by GRstartattr_name- IN: the name of the attributedata_type- IN: the number type of the data (should be DFNT_CHAR)count- IN: the length the data (lenght of 'values')values- IN: the the attribute to write -- A String- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:This routine writes a attribute that is a String. Alternative methods write data of other types.
-
GRsetattr
public static boolean GRsetattr(int gr_id, java.lang.String attr_name, int data_type, int count, byte[] values) throws HDFException- Parameters:
gr_id- IN: the GR identifier returned by GRstartattr_name- IN: the name of the attributedata_type- IN: the number type of the datacount- IN: the length the data (lenght of 'values')values- IN: the the attribute to write -- in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:This routine writes the attribute as an array of bytes. DO NOT USE THIS TO WRITE A STRING. This is intended for numeric data that has been flattened into bytes.
-
GRsetattr
public static boolean GRsetattr(int gr_id, java.lang.String attr_name, int data_type, int count, java.lang.Object theData) throws HDFException- Parameters:
gr_id- IN: the GR identifier returned by GRstartattr_name- IN: the name of the attributedata_type- IN: the number type of the datacount- IN: the length the data (lenght of 'values')theData- IN: Object -- the value to be written, a Java array of numbers.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:This routine converts the Java array to bytes then writes it. DO NOT USE THIS TO WRITE A STRING.
-
GRsetchunk
public static boolean GRsetchunk(int sdsid, HDFChunkInfo chunk_def, int flags) throws HDFException- Parameters:
sdsid- IN: the SD identifier returned by SDselectchunk_def- IN: HDFChunkInfo, the chunking infoflags- IN: the type of chunking- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:The chunking algorithm-specific information is passed in an appropriate sub-class of HDFChunkInfo.
-
GRsetchunkcache
public static int GRsetchunkcache(int sdsid, int maxcache, int flags) throws HDFException- Throws:
HDFException
-
GRsetcompress
public static boolean GRsetcompress(int ri_id, int comp_type, HDFCompInfo c_info) throws HDFException- Parameters:
ri_id- IN: the GR identifier returned by GRstartcomp_type- IN: the type of compressionc_info- IN: HDFCompInfo, the compression info- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:The compression algorithm specific information is passed in an appropriate sub-class of HDFCompInfo.
-
GRgetcompress
public static boolean GRgetcompress(int ri_id, HDFCompInfo c_info) throws HDFException- Throws:
HDFException
-
GRsetexternalfile
public static boolean GRsetexternalfile(int ri_id, java.lang.String filename, int offset) throws HDFException- Throws:
HDFException
-
GRwriteimage
public static boolean GRwriteimage(int grid, int[] start, int[] stride, int[] edge, byte[] data) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by GRstartstart- IN: int[], startstride- IN: int[], strideedge- IN: int[], countdata- IN: byte[], data to be written- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java 2D array use the alternative routine below.
-
GRwriteimage
public static boolean GRwriteimage(int grid, int[] start, int[] stride, int[] edge, java.lang.Object theData) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by GRstartstart- IN: int[], startstride- IN: int[], strideedge- IN: int[], counttheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the Java array to a contiguous block of bytes appropriate for C, and then writes the bytes.
-
GRwritelut
public static boolean GRwritelut(int pal_id, int ncomp, int data_type, int interlace, int num_entries, byte[] pal_data) throws HDFException- Parameters:
pal_id- IN: the palette identifier returned by GRgetlutidncomp- IN: int, number of componentsdata_type- IN: int, number typeinterlace- IN: int, interlacenum_entries- IN: int, number of entriespal_data- IN: byte[], palette data to be written--as bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array of numbers use the alternative routine below.
-
GRwritelut
public static boolean GRwritelut(int pal_id, int ncomp, int data_type, int interlace, int num_entries, java.lang.Object theData) throws HDFException- Parameters:
pal_id- IN: the palette identifier returned by GRgetlutidncomp- IN: int, number of componentsdata_type- IN: int, number typeinterlace- IN: int, interlacenum_entries- IN: int, number of entriestheData- IN: Object, palette data to be written, any number type.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the Java array to a contiguous block of bytes appropriate for C, and then writes the bytes.
-
GRreadchunk
public static boolean GRreadchunk(int sdsid, int[] origin, byte[] theData) throws HDFException- Parameters:
sdsid- IN: the GR interface id, returned by SDselectorigin- IN: int[], origintheData- OUT: byte[], the data in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
-
GRreadchunk
public static boolean GRreadchunk(int grid, int[] origin, java.lang.Object theData) throws HDFException- Parameters:
grid- IN: the GR interface id, returned by SDselectorigin- IN: int[], origintheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
-
HDFclose
public static boolean HDFclose(int file_id) throws HDFException- Throws:
HDFException
-
HDFopen
public static int HDFopen(java.lang.String filename, int access, short n_dds) throws HDFException- Throws:
HDFException
-
HEvalue
public static short HEvalue(int level) throws HDFException- Throws:
HDFException
-
HEstring
public static java.lang.String HEstring(int error_code) throws HDFException- Throws:
HDFException
-
HXsetcreatedir
public static boolean HXsetcreatedir(java.lang.String dir) throws HDFException- Throws:
HDFException
-
HXsetdir
public static boolean HXsetdir(java.lang.String dir) throws HDFException- Throws:
HDFException
-
SDstart
public static int SDstart(java.lang.String filename, int accessmode) throws HDFException- Throws:
HDFException
-
SDend
public static boolean SDend(int sdid) throws HDFException- Throws:
HDFException
-
SDfileinfo
public static boolean SDfileinfo(int sdid, int[] argv) throws HDFException- Parameters:
sdid- IN: the SD interface id, returned by SDstartargv- OUT: int[2], Number of datasets in the file, Number of global attributes in the file- Returns:
- the file info: argv[0] = n_datasets, argv[1] = n_file_attrs
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDselect
public static int SDselect(int sdid, int index) throws HDFException- Throws:
HDFException
-
SDnametoindex
public static int SDnametoindex(int sdid, java.lang.String name) throws HDFException- Throws:
HDFException
-
SDgetinfo
public static boolean SDgetinfo(int sdsid, java.lang.String[] name, int[] dimsizes, int[] args) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectname- OUT: String[1], the name of the datasetargs- OUT: int[3], dataset info: number of dimensions (rank), data type for the data stored in the dataset, number of "netCDF-style" attributes for this datasetdimsizes- OUT: int[(rank)], sizes of dimensions- Returns:
- the file info: name[0] = gr_name, args[0] = rank,
args[1] = data_type, args[2] = nattrs, dim_sizes[] = dimensions
NOTE: the parameters for the Java interface are not in the same order as the C interface.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDcheckempty
public static boolean SDcheckempty(int sdsid, int[] emptySDS) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectemptySDS- OUT: int[1], 1 if the SDS is empty, 0 if has data- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDreaddata
public static boolean SDreaddata(int sdsid, int[] start, int[] stride, int[] count, byte[] data) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectstart- IN: int[], startstride- IN: int[], stridecount- IN: int[], countdata- OUT: byte[], data- Returns:
- the the data in the form of a continous array of
bytes.
NOTE: to read into a Java array use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDreaddata
public static boolean SDreaddata(int sdsid, int[] start, int[] stride, int[] count, java.lang.Object theData) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectstart- IN: int[], startstride- IN: int[], stridecount- IN: int[], counttheData- OUT: Object, a Java array of appropriate type, dimensions, and size.- Returns:
- the the data in the Java array.
Note: reads the data as bytes and converts to the Java array.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDendaccess
public static boolean SDendaccess(int sdsid) throws HDFException- Throws:
HDFException
-
SDgetdimid
public static int SDgetdimid(int sdsid, int index) throws HDFException- Throws:
HDFException
-
SDdiminfo
public static boolean SDdiminfo(int dimid, java.lang.String[] name, int[] argv) throws HDFException- Parameters:
dimid- IN: the dimension id, returned by SDgetdimidname- OUT: String[1], the dimension nameargv- OUT: int[3], size of the name string, number type of data in the array, # attributes for the dimension- Returns:
- name[0] = name, argv[0] = count, argv[1] = data_type, argv[2] = nattr
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDidtoref
public static int SDidtoref(int sdsid) throws HDFException- Throws:
HDFException
-
SDreftoindex
public static int SDreftoindex(int sdid, int ref) throws HDFException- Throws:
HDFException
-
SDattrinfo
public static boolean SDattrinfo(int id, int index, java.lang.String[] name, int[] argv) throws HDFException- Parameters:
id- IN: id of a file, SDS, or dimensionindex- IN: index of the attributename- OUT: String[1], the name of the attributeargv- OUT: int[2], number type of the attribute, number of values in the attribute- Returns:
- name[0] = attr_name, argv[0] = data_type, argv[1] = count
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDreadattr
public static boolean SDreadattr(int id, int index, byte[] data) throws HDFException- Parameters:
id- IN: id of a file, SDS, or dimensionindex- IN: index of the attributedata- OUT: byte[], data- Returns:
- the the data in the form of a continous array of
bytes.
NOTE: to read into a Java array use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDreadattr
public static boolean SDreadattr(int id, int index, java.lang.Object theData) throws HDFException- Parameters:
id- IN: id of a file, SDS, or dimensionindex- IN: index of the attributetheData- OUT: Object, a Java array of appropriate type, dimensions, and size.- Returns:
- the the data in the Java array.
Note: reads the data as bytes and converts to the Java array.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDfindattr
public static int SDfindattr(int id, java.lang.String name) throws HDFException- Throws:
HDFException
-
SDiscoordvar
public static boolean SDiscoordvar(int sdsid) throws HDFException- Throws:
HDFException
-
SDgetcal
public static boolean SDgetcal(int sdsid, double[] argv, int[] NT) throws HDFException- Parameters:
sdsid- IN: id of the SDS as returned by SDselectargv- OUT: double[4], calibration information: calibration factor calibration error offset offset errorNT- OUT: int[1], number type of uncalibrated data- Returns:
- argv[0] = cal, argv[1] = cal_err, argv[2] = offset, argv[3] = offset_err, NT[0] = data_type
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetdatastrs
public static boolean SDgetdatastrs(int sdsid, java.lang.String[] strings, int len) throws HDFException- Parameters:
sdsid- IN: id of the SDS as returned by SDselectstrings- OUT: String[4], data information strings: label unit print format coordinate systemlen- IN: int, max len of string (not needed by Java -- the HDFLibrary interface will handle this)- Returns:
- strings[0] = label, strings[1] = unit, strings[2] = format, strings[3] = coordsys,
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetdimstrs
public static boolean SDgetdimstrs(int dimid, java.lang.String[] args, int len) throws HDFException- Parameters:
dimid- IN: id of the SDS as returned by SDselectargs- OUT: String[4], data information strings: label unit print formatlen- IN: int, max len of string (not needed by Java -- the HDFLibrary interface will handle this)- Returns:
- strings[0] = label, strings[1] = unit, strings[2] = format
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetdimscale
public static boolean SDgetdimscale(int dimid, byte[] data) throws HDFException- Parameters:
dimid- IN: id of a dimension as returned by SDgetdimiddata- OUT: byte[], data- Returns:
- the the data in the form of a continous array of
bytes.
NOTE: to read into a Java array use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetdimscale
public static boolean SDgetdimscale(int dimid, java.lang.Object theData) throws HDFException- Parameters:
dimid- IN: id of a dimension as returned by SDgetdimidtheData- OUT: Object, a Java array of appropriate type and size.- Returns:
- the the data in the Java array.
Note: reads the data as bytes and converts to the Java array.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetfillvalue
public static boolean SDgetfillvalue(int sdsid, byte[] fillValue) throws HDFException- Parameters:
sdsid- IN: id of the SDS as returned by SDselectfillValue- OUT: byte[], data- Returns:
- the the fill value in the form of a continous array of
bytes.
NOTE: to read into a Java variable use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetfillvalue
public static boolean SDgetfillvalue(int sdsid, java.lang.Object[] theFillValue) throws HDFException- Parameters:
sdsid- IN: id of the SDS as returned by SDselecttheFillValue- OUT: Object[1], one object of appropriate type- Returns:
- the the data in the Java array: theFillValue[0] = fillValue
Note: the routine calls SDgetinfo to determine the correct type, reads the data as bytes, and converts to the appropriate Java object.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetrange
public static boolean SDgetrange(int sdsid, byte[] max, byte[] min) throws HDFException- Parameters:
sdsid- IN: id of the SDS as returned by SDselectmax- OUT: byte[], max value, as bytesmin- OUT: byte[], min value, as bytes- Returns:
- the the max and min values in the form of a continous array of
bytes.
NOTE: to read into Java doubles, use the alternative routine below.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDgetrange
public static boolean SDgetrange(int sdsid, double[] maxmin) throws HDFException- Parameters:
sdsid- IN: id of the SDS as returned by SDselectmaxmin- OUT: double[2], the max and min values converted to doubles- Returns:
- the the data in the Java array: maxmin[0] = max,
maxmin[1] = min
Note: the routine calls SDgetinfo to determine the correct type, reads the data as bytes, and converts to the double.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDcreate
public static int SDcreate(int sd_id, java.lang.String name, int number_type, int rank, int[] dimsizes) throws HDFException- Throws:
HDFException
-
SDisrecord
public static boolean SDisrecord(int sdsid) throws HDFException- Throws:
HDFException
-
SDsetattr
public static boolean SDsetattr(int s_id, java.lang.String attr_name, int num_type, int count, byte[] values) throws HDFException- Throws:
HDFException
-
SDsetattr
public static boolean SDsetattr(int s_id, java.lang.String attr_name, int num_type, int count, java.lang.Object theValues) throws HDFException- Throws:
HDFException
-
SDsetcal
public static boolean SDsetcal(int sds_id, double cal, double cal_err, double offset, double offset_err, int number_type) throws HDFException- Throws:
HDFException
-
SDsetdatastrs
public static boolean SDsetdatastrs(int sds_id, java.lang.String label, java.lang.String unit, java.lang.String format, java.lang.String coordsys) throws HDFException- Throws:
HDFException
-
SDsetdimname
public static boolean SDsetdimname(int dim_id, java.lang.String dim_name) throws HDFException- Throws:
HDFException
-
SDsetdimscale
public static boolean SDsetdimscale(int dim_id, int count, int number_type, byte[] data) throws HDFException- Parameters:
dim_id- IN: id of a dimensioncount- IN: number of valuesnumber_type- IN: number type of the valuesdata- IN: byte[], the values, in an array of bytes.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: the calling program must assure that the data is correctly formatted for C. To write an array of Java objects, use the alternative routine below.
-
SDsetdimscale
public static boolean SDsetdimscale(int dim_id, int count, int number_type, java.lang.Object theData) throws HDFException- Parameters:
dim_id- IN: id of a dimensioncount- IN: number of valuesnumber_type- IN: number type of the valuestheData- OUT: Object, a Java array of appropriate type and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the Java array to an array of bytes, and writes the bytes.
-
SDsetdimstrs
public static boolean SDsetdimstrs(int dim_id, java.lang.String label, java.lang.String unit, java.lang.String format) throws HDFException- Throws:
HDFException
-
SDsetexternalfile
public static boolean SDsetexternalfile(int sds_id, java.lang.String filename, int offset) throws HDFException- Throws:
HDFException
-
SDsetfillvalue
public static boolean SDsetfillvalue(int sds_id, byte[] fill_val) throws HDFException- Parameters:
sds_id- IN: id of a datasetfill_val- IN: byte[], the fill values in an array of bytes.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: the calling program must assure that the data is correctly formatted for C. To set the fill value with a Java object, use the alternative routine below.
-
SDsetfillvalue
public static boolean SDsetfillvalue(int sds_id, java.lang.Object the_fill_val) throws HDFException- Parameters:
sds_id- IN: id of a datasetthe_fill_val- IN: Object, a Java object of appropriate type- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the Java array to an array of bytes, and writes the bytes.
-
SDsetrange
public static boolean SDsetrange(int sdsid, byte[] max, byte[] min) throws HDFException- Parameters:
sdsid- IN: id of a datasetmax- IN: byte[], the max value in an array of bytesmin- IN: byte[], the min value in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: the calling program must assure that the data is correctly formatted for C. To set the max and min value with Java objects, use the alternative routine below.
-
SDsetrange
public static boolean SDsetrange(int sdsid, java.lang.Object max, java.lang.Object min) throws HDFException- Parameters:
sdsid- IN: id of a datasetmax- IN: Object, a Java object of appropriate typemin- IN: Object, a Java object of appropriate type- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the Java array to an array of bytes, and writes the bytes.
-
SDwritedata
public static boolean SDwritedata(int sdsid, int[] start, int[] stride, int[] count, byte[] data) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectstart- IN: int[], startstride- IN: int[], stridecount- IN: int[], countdata- IN: byte[], data in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
-
SDwritedata
public static boolean SDwritedata(int sdsid, int[] start, int[] stride, int[] count, java.lang.Object theData) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectstart- IN: int[], startstride- IN: int[], stridecount- IN: int[], counttheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts to the Java array to a contiguous array of bytes and then writes to the file.
-
SDsetnbitdataset
public static boolean SDsetnbitdataset(int id, int start_bit, int bit_len, int sign_ext, int fill_one) throws HDFException- Throws:
HDFException
-
SDsetcompress
public static boolean SDsetcompress(int id, int type, HDFCompInfo cinfo) throws HDFException- Parameters:
id- IN: the SD identifier returned by SDselecttype- IN: the type of compressioncinfo- IN: HDFCompInfo, the compression info- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:The compression algorithm specific information is passed in an appropriate sub-class of HDFCompInfo.
-
SDgetcompress
@Deprecated public static boolean SDgetcompress(int id, HDFCompInfo cinfo) throws HDFExceptionDeprecated.As of HDF 4.2.9, replaced bySDgetcompinfo(int, HDFCompInfo)- Throws:
HDFException
-
SDgetcompinfo
public static boolean SDgetcompinfo(int id, HDFCompInfo cinfo) throws HDFException- Throws:
HDFException
-
SDsetaccesstype
public static boolean SDsetaccesstype(int id, int accesstype) throws HDFException- Throws:
HDFException
-
SDsetblocksize
public static boolean SDsetblocksize(int sdsid, int block_size) throws HDFException- Throws:
HDFException
-
SDsetfillmode
public static boolean SDsetfillmode(int sdsid, boolean fill_enable) throws HDFException- Parameters:
sdsid- IN: the SD idfill_enable- IN: boolean, true calls library with SD_FILL, false calls library with SD_NOFILL- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDsetfillmode
public static boolean SDsetfillmode(int sdsid, int fillmode) throws HDFException- Throws:
HDFException
-
SDsetdimval_comp
public static boolean SDsetdimval_comp(int dimid, int comp_mode) throws HDFException- Throws:
HDFException
-
SDisdimval_bwcomp
public static boolean SDisdimval_bwcomp(int dimid) throws HDFException- Throws:
HDFException
-
SDsetchunk
public static boolean SDsetchunk(int sdsid, HDFChunkInfo chunk_def, int flags) throws HDFException- Parameters:
sdsid- IN: the SD identifier returned by SDselectchunk_def- IN: HDFChunkInfo, the chunking infoflags- IN: the type of chunking- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE:The chunking algorithm-specific information is passed in an appropriate sub-class of HDFChunkInfo.
-
SDgetchunkinfo
public static boolean SDgetchunkinfo(int sdsid, HDFChunkInfo chunk_def, int[] clflags) throws HDFException- Parameters:
sdsid- IN: the SD identifier returned by SDselectchunk_def- OUT: HDFChunkInfo, the chunking infoclflags- OUT: int[1], the type of chunking- Returns:
- c_info contains information about the chunking method,
clflags[0] == the chunking flags
NOTE:The chunking algorithm-specific information is passed in an appropriate sub-class of HDFChunkInfo.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
SDreadchunk
public static boolean SDreadchunk(int sdsid, int[] origin, byte[] theData) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectorigin- IN: int[], origintheData- OUT: byte[], the data in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
-
SDreadchunk
public static boolean SDreadchunk(int sdsid, int[] origin, java.lang.Object theData) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectorigin- IN: int[], origintheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
-
SDsetchunkcache
public static int SDsetchunkcache(int sdsid, int maxcache, int flags) throws HDFException- Throws:
HDFException
-
SDwritechunk
public static boolean SDwritechunk(int sdsid, int[] origin, byte[] data) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectorigin- IN: int[], origindata- IN: byte[], data to be written, in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
-
SDwritechunk
public static boolean SDwritechunk(int sdsid, int[] origin, java.lang.Object theData) throws HDFException- Parameters:
sdsid- IN: the SD interface id, returned by SDselectorigin- IN: int[], origintheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts to the Java array to a contiguous array of bytes and then writes to the file.
-
VFfieldesize
public static int VFfieldesize(int vdata_id, int field_index) throws HDFException- Throws:
HDFException
-
VFfieldisize
public static int VFfieldisize(int vdata_id, int field_index) throws HDFException- Throws:
HDFException
-
VFfieldname
public static java.lang.String VFfieldname(int vdata_id, int field_index) throws HDFException- Throws:
HDFException
-
VFfieldorder
public static int VFfieldorder(int vdata_id, int field_index) throws HDFException- Throws:
HDFException
-
VFfieldtype
public static int VFfieldtype(int vdata_id, int field_index) throws HDFException- Throws:
HDFException
-
VFnfields
public static int VFnfields(int vkey) throws HDFException- Throws:
HDFException
-
VHmakegroup
public static int VHmakegroup(int file_id, int[] tag_array, int[] ref_array, int n_objects, java.lang.String vgroup_name, java.lang.String vgroup_class) throws HDFException- Throws:
HDFException
-
VHstoredata
public static int VHstoredata(int file_id, java.lang.String fieldname, byte[] buf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class) throws HDFException- Parameters:
file_id- IN: the SD interface id, returned by SDselectfieldname- IN: String, the name of the field to be filledbuf- IN: byte[], data to be written, in an array of bytesn_records- IN: int, the number of records being writtendata_type- IN: int, the number type of the datavdata_name- IN: String, the name of the Vdatavdata_class- IN: String, the class of the Vdata- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
-
VHstoredata
public static int VHstoredata(int file_id, java.lang.String fieldname, java.lang.Object thebuf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class) throws HDFException- Parameters:
file_id- IN: the SD interface id, returned by SDselectfieldname- IN: String, the name of the field to be filledthebuf- IN: Object, data to be written, in a Java array of appropriate type and sizen_records- IN: int, the number of records being writtendata_type- IN: int, the number type of the datavdata_name- IN: String, the name of the Vdatavdata_class- IN: String, the class of the Vdata- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts to the Java array to a contiguous array of bytes and then writes to the file.
-
VHstoredatam
public static int VHstoredatam(int file_id, java.lang.String fieldname, byte[] buf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class, int order) throws HDFException- Parameters:
file_id- IN: the SD interface id, returned by SDselectfieldname- IN: String, the name of the field to be filledbuf- IN: byte[], data to be written, in an array of bytesn_records- IN: int, the number of records being writtendata_type- IN: int, the number type of the datavdata_name- IN: String, the name of the Vdatavdata_class- IN: String, the class of the Vdataorder- IN: int, the number of components per field- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
-
VHstoredatam
public static int VHstoredatam(int file_id, java.lang.String fieldname, java.lang.Object buf, int n_records, int data_type, java.lang.String vdata_name, java.lang.String vdata_class, int order) throws HDFException- Parameters:
file_id- IN: the SD interface id, returned by SDselectfieldname- IN: String, the name of the field to be filledbuf- IN: Object, data to be written, in a Java array of appropriate type, dimension, and sizen_records- IN: int, the number of records being writtendata_type- IN: int, the number type of the datavdata_name- IN: String, the name of the Vdatavdata_class- IN: String, the class of the Vdataorder- IN: int, the number of components per field- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts to the Java array to a contiguous array of bytes and then writes to the file.
-
VQueryref
public static int VQueryref(int vkey) throws HDFException- Throws:
HDFException
-
VQuerytag
public static int VQuerytag(int vkey) throws HDFException- Throws:
HDFException
-
VSQuerycount
public static boolean VSQuerycount(int vdata_id, int[] n_records) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachn_records- OUT, int[1], the number of records in the vdata- Returns:
- n_records[0] == the number of records
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSQueryfields
public static boolean VSQueryfields(int vdata_id, java.lang.String[] fields) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachfields- OUT, String[1], the names of the fields- Returns:
- fields[0] == a comma delimited string with the names of the fields.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSQueryinterlace
public static boolean VSQueryinterlace(int vdata_id, int[] interlace) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachinterlace- OUT, int[1], the interlace mode,- Returns:
- interlace[0] == the number of records, HDFConstants.FULL_INTERLACE or HDFConstants.NO_INTERLACE
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSQueryname
public static boolean VSQueryname(int vdata_id, java.lang.String[] vdata_name) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachvdata_name- OUT, String[1], the name of the vdata- Returns:
- vdata_name[0] == the name
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSQueryref
public static int VSQueryref(int vdata_id) throws HDFException- Throws:
HDFException
-
VSQuerytag
public static int VSQuerytag(int vdata_id) throws HDFException- Throws:
HDFException
-
VSQueryvsize
public static boolean VSQueryvsize(int vdata_id, int[] vdata_size) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachvdata_size- OUT, int[1], the size of the vdata- Returns:
- vdata_size[0] == Native size, in bytes, of a record in the vdata
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSattach
public static int VSattach(int fid, int vdata_ref, java.lang.String access) throws HDFException- Throws:
HDFException
-
VSdetach
public static void VSdetach(int vdata_id) throws HDFException- Throws:
HDFException
-
VSgetid
public static int VSgetid(int file_id, int vdata_ref) throws HDFException- Throws:
HDFException
-
VSgetclass
public static void VSgetclass(int vdata_id, java.lang.String[] hdfclassname) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachhdfclassname- OUT, String[1], the class name of the vdata- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSgetname
public static void VSgetname(int vdata_id, java.lang.String[] hdfname) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachhdfname- OUT, String[1], the name of the vdata- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSelts
public static int VSelts(int vdata_id) throws HDFException- Throws:
HDFException
-
VSfdefine
public static boolean VSfdefine(int vdata_id, java.lang.String fieldname, int numbertype, int order) throws HDFException- Throws:
HDFException
-
VSfexist
public static boolean VSfexist(int vdata_id, java.lang.String fields) throws HDFException- Throws:
HDFException
-
VSfind
public static int VSfind(int file_id, java.lang.String vdataname) throws HDFException- Throws:
HDFException
-
VSsetblocksize
public static int VSsetblocksize(int vdata_id, int blocksize) throws HDFException- Throws:
HDFException
-
VSsetnumblocks
public static int VSsetnumblocks(int vdata_id, int numblocks) throws HDFException- Throws:
HDFException
-
VSgetfields
public static int VSgetfields(int vdata_id, java.lang.String[] fieldname) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachfieldname- OUT, String[1], the names of the fields- Returns:
- fieldname[0] == a comma delimited string with the names of the fields.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSgetinterlace
public static int VSgetinterlace(int vdata_id) throws HDFException- Throws:
HDFException
-
VSinquire
public static boolean VSinquire(int vdata_id, int[] iargs, java.lang.String[] sargs) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachiargs- OUT, int[3], n_records, interlace, vdata_sizesargs- OUT, String[2], names the dataset, fields- Returns:
- iargs[0] = n_records, iargs[1] = interlace, iargs[2] = vdata_size,
sargs[0] = vdata_name, sargs[1] = comma delimited list of fields
NOTE: the parameters for the Java interface are not in the same order as the C interface.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSinquire
public static boolean VSinquire(int vdata_id, int[] iargs) throws HDFException- Parameters:
vdata_id- IN, vdata id as returned by VSattachiargs- OUT, int[2], block_size, num_blocks- Returns:
- iargs[0] = blocksize, iargs[1] = num_blocks
NOTE: the parameters for the Java interface are not in the same order as the C interface.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSlone
public static int VSlone(int fid, int[] ref_array, int buffersize) throws HDFException- Parameters:
fid- IN, File identifier returned by Hopenref_array- OUT, int[?], the refsbuffersize- IN, int, the max number of refs to return.- Returns:
- ref_array contains refs. The Java API ignores the buffersize argument, returns as many as possible.
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
VSread
public static int VSread(int vdata_id, byte[] databuf, int nrecord, int interlace) throws HDFException- Parameters:
vdata_id- IN: the Vdata iddatabuf- OUT: byte[], the data in an array of bytesnrecord- IN: int, number of recordsinterlace- IN: int, interlace- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
-
VSread
public static int VSread(int vdata_id, java.lang.Object theData, int nrecord, int interlace) throws HDFException- Parameters:
vdata_id- IN: the Vdata idtheData- OUT: Object, a Java array of appropriate type, dimensions, and size.nrecord- IN: int, number of recordsinterlace- IN: int, interlace- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
-
VSseek
public static int VSseek(int vdata_id, int record) throws HDFException- Throws:
HDFException
-
VSsetfields
public static boolean VSsetfields(int vdata_id, java.lang.String fields) throws HDFException- Throws:
HDFException
-
VSsetinterlace
public static boolean VSsetinterlace(int vdata_id, int interlace) throws HDFException- Throws:
HDFException
-
VSsizeof
public static int VSsizeof(int vdata_id, java.lang.String fields) throws HDFException- Throws:
HDFException
-
VSappendable
public static boolean VSappendable(int vkey, int block_size) throws HDFException- Throws:
HDFException
-
VSfindclass
public static int VSfindclass(int file_id, java.lang.String vgclass) throws HDFException- Throws:
HDFException
-
VSgetversion
public static int VSgetversion(int vkey) throws HDFException- Throws:
HDFException
-
VSsetclass
public static void VSsetclass(int vdata_id, java.lang.String vdata_class) throws HDFException- Throws:
HDFException
-
VSsetexternalfile
public static boolean VSsetexternalfile(int vkey, java.lang.String filename, int offset) throws HDFException- Throws:
HDFException
-
VSsetname
public static void VSsetname(int vdata_id, java.lang.String vdata_name) throws HDFException- Throws:
HDFException
-
VSwrite
public static int VSwrite(int vdata_id, byte[] databuf, int n_records, int interlace) throws HDFException- Parameters:
vdata_id- IN: the Vdata iddatabuf- IN: byte[], the data in an array of bytesn_records- IN: int, number of recordsinterlace- IN: int, interlace- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write a Java array use the alternative routine below.
-
VSwrite
public static int VSwrite(int vdata_id, java.lang.Object databuf, int n_records, int interlace) throws HDFException- Parameters:
vdata_id- IN: the Vdata iddatabuf- IN: Object, a Java array of appropriate type, dimensions, and size.n_records- IN: int, number of recordsinterlace- IN: int, interlace- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Important Note: This interface only supports records which are all of the same numeric type, with no character fields. Heterogeneous fields can be written as bytes (see above), but the calling program must make sure the data is in proper order to write to the HDF library.
Note: converts the data into a contiguous array of bytes and then writes it
-
Vstart
public static boolean Vstart(int fid) throws HDFException- Throws:
HDFException
-
Vattach
public static int Vattach(int fid, int vgroup_ref, java.lang.String access) throws HDFException- Throws:
HDFException
-
Vdetach
public static void Vdetach(int vgroup_id) throws HDFException- Throws:
HDFException
-
Vend
public static void Vend(int file_id) throws HDFException- Throws:
HDFException
-
Vgetid
public static int Vgetid(int file_id, int vgroup_ref) throws HDFException- Throws:
HDFException
-
Vgetclass
public static void Vgetclass(int vgroup_id, java.lang.String[] hdfclassname) throws HDFException- Parameters:
vgroup_id- IN: the Vgroup idhdfclassname- OUT: String[1], the HDF class of the vgroup.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
Vgetname
public static void Vgetname(int vgroup_id, java.lang.String[] hdfname) throws HDFException- Parameters:
vgroup_id- IN: the Vgroup idhdfname- OUT: String[1], the name of the vgroup.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
-
Visvg
public static boolean Visvg(int vgroup_id, int vgroup_ref) throws HDFException- Throws:
HDFException
-
Visvs
public static boolean Visvs(int vgroup_id, int vdata_ref) throws HDFException- Throws:
HDFException
-
Vgettagrefs
public static int Vgettagrefs(int vgroup_id, int[] tags, int[] refs, int arraysize) throws HDFException- Parameters:
vgroup_id- IN: the Vgroup idtags- OUT: int[arraysize], the tagsrefs- OUT: int[arraysize], the refsarraysize- IN: int, the number of tags/refs to return- Returns:
- tags[] = tags for objects 0 - n, refs[] = refs for objects 0 - n
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Vgettagref
public static boolean Vgettagref(int vgroup_id, int index, int[] tagref) throws HDFException- Parameters:
vgroup_id- - IN: the Vgroup idindex- - IN: the index of the objecttagref- - OUT: tagref[0]=tag, tagref[1]=ref- Returns:
- tags[0] = tag for object #index, refs[0] = ref for objects #index
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Vntagrefs
public static int Vntagrefs(int vgroup_id) throws HDFException- Throws:
HDFException
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Vinqtagref
public static boolean Vinqtagref(int vgroup_id, int tag, int ref) throws HDFException- Throws:
HDFException
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Vlone
public static int Vlone(int fid, int[] ref_array, int buffersize) throws HDFException- Parameters:
fid- IN: the file identifier returned by Hopenref_array- OUT: int[], the refs for Vdata not part of Vgroupsbuffersize- IN: the max size of the ref_array- Returns:
- ref_array[] = refs 0 - ...
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Vaddtagref
public static int Vaddtagref(int vgroup_id, int tag, int ref) throws HDFException- Throws:
HDFException
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Vdeletetagref
public static int Vdeletetagref(int vgroup_id, int tag, int ref) throws HDFException- Throws:
HDFException
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Vfind
public static int Vfind(int file_id, java.lang.String vgroup_name) throws HDFException- Throws:
HDFException
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Vfindclass
public static int Vfindclass(int file_id, java.lang.String vgclassname) throws HDFException- Throws:
HDFException
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Vflocate
public static int Vflocate(int key, java.lang.String vgclassname) throws HDFException- Throws:
HDFException
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Vgetnext
public static int Vgetnext(int key, int ref) throws HDFException- Throws:
HDFException
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Vinquire
public static boolean Vinquire(int vgroup_id, int[] n_entries, java.lang.String[] vgroup_name) throws HDFException- Parameters:
vgroup_id- IN: the Vgroup idn_entries- OUT: int[1], the number of objects in the Vgroupvgroup_name- OUT: String[1], the name of the Vgroup- Returns:
- n_entries[0] = number of entries, vgroup_name[0] = the name
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Vinsert
public static int Vinsert(int vgroup_id, int v_id) throws HDFException- Throws:
HDFException
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Vnrefs
public static int Vnrefs(int key, int ref) throws HDFException- Throws:
HDFException
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Vsetclass
public static boolean Vsetclass(int vgroup_id, java.lang.String vgclassname) throws HDFException- Throws:
HDFException
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Vsetname
public static boolean Vsetname(int vgroup_id, java.lang.String vgname) throws HDFException- Throws:
HDFException
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Vattrinfo
public static boolean Vattrinfo(int id, int index, java.lang.String[] name, int[] argv) throws HDFException- Parameters:
id- IN: Vgroup identifier returned by Vattachindex- IN: the index of the attributename- OUT: String[1], the name of the attributeargv- OUT: int[3], Data type of the target attribute, Number of values in the target attribute, Size, in bytes, of the values of the target attribute,- Returns:
- name[0] = name, argv[0] = data_type, argv[1] = count, argv[2] = size, argv[3] = nfields, argv[4] = refnum
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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Vfindattr
public static int Vfindattr(int id, java.lang.String name) throws HDFException- Throws:
HDFException
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Vgetattr
public static boolean Vgetattr(int id, int index, byte[] data) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the attributedata- OUT: byte[], the data in an array of bytes- Returns:
- data = the value of the attribute, in an array of bytes
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
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Vgetattr
public static boolean Vgetattr(int id, int index, java.lang.Object theData) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the attributetheData- OUT: Object, a Java array of appropriate type, dimensions, and size.- Returns:
- data = the value of the attribute, in an array of Java objects
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
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Vgetversion
public static int Vgetversion(int id) throws HDFException- Throws:
HDFException
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Vnattrs
public static int Vnattrs(int id) throws HDFException- Throws:
HDFException
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Vsetattr
public static boolean Vsetattr(int id, java.lang.String attr_name, int data_type, int count, java.lang.String values) throws HDFException- Throws:
HDFException
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Vsetattr
public static boolean Vsetattr(int id, java.lang.String attr_name, int data_type, int count, byte[] data) throws HDFException- Parameters:
id- IN: the Vdata idattr_name- IN: String, the name of the attributedata_type- IN: int, the number_type of the attributecount- IN: the number of valuesdata- IN: byte[], the data in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write into a Java array use the alternative routine below.
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Vsetattr
public static boolean Vsetattr(int id, java.lang.String attr_name, int data_type, int count, java.lang.Object theData) throws HDFException- Parameters:
id- IN: the Vdata idattr_name- IN: String, the name of the attributedata_type- IN: int, the number_type of the attributecount- IN: the number of valuestheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the data to a contiguous array of bytes and then converts writes it.
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VSattrinfo
public static boolean VSattrinfo(int id, int index, int attr_index, java.lang.String[] name, int[] argv) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: int, the index of the attributeattr_index- IN: int, the index of the attributename- OUT: String[1], the name of the attributeargv- OUT: int[3], Data type of the target attribute, Number of values in the target attribute, Size, in bytes, of the values of the target attribute,- Returns:
- name[0] = name, argv[0] = data_type, argv[1] = count, argv[2] = size
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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VSfindex
public static int VSfindex(int id, java.lang.String name, int[] findex) throws HDFException- Parameters:
id- IN: the Vdata idname- IN: the name of the attributefindex- IN: int[1], the index of the attribute- Returns:
- findex[0] = the index
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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VSfindattr
public static int VSfindattr(int id, int index, java.lang.String name) throws HDFException- Throws:
HDFException
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VSfnattrs
public static int VSfnattrs(int id, int fnattrs) throws HDFException- Throws:
HDFException
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VSgetattr
public static boolean VSgetattr(int id, int index, int attr_index, byte[] data) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the vdataattr_index- IN: the index of the attributedata- OUT: byte[], the data in an array of bytes- Returns:
- data = the value of the attribute, in an array of bytes
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
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VSgetattr
public static boolean VSgetattr(int id, int index, int attr_index, java.lang.Object theData) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the vdataattr_index- IN: the index of the attributetheData- OUT: Object, a Java array of appropriate type, dimensions, and size.- Returns:
- data = the value of the attribute, in an array of Java objects
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
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VSisattr
public static boolean VSisattr(int id) throws HDFException- Throws:
HDFException
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VSnattrs
public static int VSnattrs(int id) throws HDFException- Throws:
HDFException
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VSsetattr
public static boolean VSsetattr(int id, int index, java.lang.String attr_name, int data_type, int count, java.lang.String values) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the vdataattr_name- IN: String, the name of the attributedata_type- IN: int, the number_type of the attributecount- IN: the number of valuesvalues- IN: Strin, the data in an String- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
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VSsetattr
public static boolean VSsetattr(int id, int index, java.lang.String attr_name, int data_type, int count, byte[] values) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the vdataattr_name- IN: String, the name of the attributedata_type- IN: int, the number_type of the attributecount- IN: the number of valuesvalues- IN: byte[], the data in an array of bytes- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write into a Java array use the alternative routine below.
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VSsetattr
public static boolean VSsetattr(int id, int index, java.lang.String attr_name, int data_type, int count, java.lang.Object theData) throws HDFException- Parameters:
id- IN: the Vdata idindex- IN: the index of the vdataattr_name- IN: String, the name of the attributedata_type- IN: int, the number_type of the attributecount- IN: the number of valuestheData- IN: Object, a Java array of appropriate type, dimensions, and size.- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the data to a contiguous array of bytes and then converts writes it.
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DF24getdims
public static boolean DF24getdims(java.lang.String fileName, int[] argv) throws HDFException- Throws:
HDFException
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DF24reqil
public static boolean DF24reqil(int il) throws HDFException- Throws:
HDFException
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DF24getimage
public static boolean DF24getimage(java.lang.String fileName, byte[] imagedata, int width, int height) throws HDFException- Parameters:
fileName- IN: String, the fileimagedata- OUT: byte[], the image, in an array of byteswidth- IN: int, the width of the imageheight- IN: int, the height of the image- Returns:
- data = the image in an array of bytes
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
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DF24getimage
public static boolean DF24getimage(java.lang.String fileName, java.lang.Object theImagedata, int width, int height) throws HDFException- Parameters:
fileName- IN: String, the filetheImagedata- OUT: Object, the image, in a java array of appropriate size and typewidth- IN: int, the width of the imageheight- IN: int, the height of the image- Returns:
- data = the value of the attribute, in an array of Java objects
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
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DF24lastref
public static short DF24lastref() throws HDFException- Throws:
HDFException
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DF24restart
public static boolean DF24restart() throws HDFException- Throws:
HDFException
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DF24readref
public static boolean DF24readref(java.lang.String filename, int ref) throws HDFException- Throws:
HDFException
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DF24nimages
public static int DF24nimages(java.lang.String fileName) throws HDFException- Throws:
HDFException
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DF24addimage
public static boolean DF24addimage(java.lang.String filename, byte[] image, int width, int height) throws HDFException- Parameters:
filename- IN: String, the fileimage- IN: byte[], the image, in an array of byteswidth- IN: int, the width of the imageheight- IN: int, the height of the image- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
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DF24addimage
public static boolean DF24addimage(java.lang.String filename, java.lang.Object theImage, int width, int height) throws HDFException- Parameters:
filename- IN: String, the filetheImage- IN: Object, the image, in a java array of appropriate size and typewidth- IN: int, the width of the imageheight- IN: int, the height of the image- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the data into a contiguous array of bytes and then writes it to the file
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DF24putimage
public static boolean DF24putimage(java.lang.String filename, byte[] image, int width, int height) throws HDFException- Parameters:
filename- IN: String, the fileimage- IN: byte[], the image, in an array of byteswidth- IN: int, the width of the imageheight- IN: int, the height of the image- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
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DF24putimage
public static boolean DF24putimage(java.lang.String filename, java.lang.Object theImage, int width, int height) throws HDFException- Parameters:
filename- IN: String, the filetheImage- IN: Object, the image, in a java array of appropriate size and typewidth- IN: int, the width of the imageheight- IN: int, the height of the image- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the data into a contiguous array of bytes and then writes it to the file
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DF24setcompress
public static boolean DF24setcompress(int type, HDFCompInfo cinfo) throws HDFException- Parameters:
type- IN: int, the type of compressioncinfo- IN: HDFCompInfo, the compression parameters- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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DF24setdims
public static boolean DF24setdims(int width, int height) throws HDFException- Throws:
HDFException
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DF24setil
public static boolean DF24setil(int il) throws HDFException- Throws:
HDFException
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DFR8getdims
public static boolean DFR8getdims(java.lang.String fileName, int[] argv, boolean[] haspalette) throws HDFException- Throws:
HDFException
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DFR8getimage
public static boolean DFR8getimage(java.lang.String fileName, byte[] imagedata, int width, int height, byte[] palette) throws HDFException- Parameters:
fileName- IN: String, the fileimagedata- OUT: byte[], the image, in an array of byteswidth- IN: int, the width of the imageheight- IN: int, the height of the imagepalette- OUT: byte[], the color look up table- Returns:
- data = imagedata: the image in an array of bytes, palette: the look up table, in an array of bytes
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to read into a Java array use the alternative routine below.
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DFR8getimage
public static boolean DFR8getimage(java.lang.String fileName, java.lang.Object theImagedata, int width, int height, byte[] palette) throws HDFException- Parameters:
fileName- IN: String, the filetheImagedata- OUT: Object, the image, in a java array of appropriate size and typewidth- IN: int, the width of the imageheight- IN: int, the height of the imagepalette- OUT: byte[], the color look up table- Returns:
- data = theImagedata: the value of the attribute, in an array of Java objects palette: the look up table, in an array of bytes
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: reads the data as a contiguous array of bytes and then converts it to an appropriate Java object.
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DFR8lastref
public static short DFR8lastref() throws HDFException- Throws:
HDFException
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DFR8restart
public static boolean DFR8restart() throws HDFException- Throws:
HDFException
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DFR8readref
public static boolean DFR8readref(java.lang.String filename, int ref) throws HDFException- Throws:
HDFException
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DFR8nimages
public static int DFR8nimages(java.lang.String fileName) throws HDFException- Throws:
HDFException
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DFR8addimage
public static boolean DFR8addimage(java.lang.String filename, byte[] image, int width, int height, short compress) throws HDFException- Parameters:
filename- IN: String, the fileimage- IN: byte[], the image, in an array of byteswidth- IN: int, the width of the imageheight- IN: int, the height of the imagecompress- IN: short, the type of compression- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
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DFR8addimage
public static boolean DFR8addimage(java.lang.String filename, java.lang.Object theImage, int width, int height, short compress) throws HDFException- Parameters:
filename- IN: String, the filetheImage- IN: Object, the image, in a java array of appropriate size and typewidth- IN: int, the width of the imageheight- IN: int, the height of the imagecompress- IN: short, the type of compression- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the data into a contiguous array of bytes and then writes it to the file
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DFR8putimage
public static boolean DFR8putimage(java.lang.String filename, byte[] image, int width, int height, short compress) throws HDFException- Parameters:
filename- IN: String, the fileimage- IN: byte[], the image, in an array of byteswidth- IN: int, the width of the imageheight- IN: int, the height of the imagecompress- IN: short, the type of compression- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.NOTE: to write from a Java array use the alternative routine below.
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DFR8putimage
public static boolean DFR8putimage(java.lang.String filename, java.lang.Object theImage, int width, int height, short compress) throws HDFException- Parameters:
filename- IN: String, the filetheImage- IN: Object, the image, in a java array of appropriate size and typewidth- IN: int, the width of the imageheight- IN: int, the height of the imagecompress- IN: short, the type of compression- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.Note: converts the data into a contiguous array of bytes and then writes it to the file
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DFR8setcompress
public static boolean DFR8setcompress(int type, HDFCompInfo cinfo) throws HDFException- Parameters:
type- IN: int, the type of compressioncinfo- IN: HDFCompInfo, the compression parameters- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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DFR8getpalref
public static boolean DFR8getpalref(short[] palref) throws HDFException- Parameters:
palref- OUT: short[1], the HDF ref of the palette- Returns:
- palref[0] = the ref of the palette
- Throws:
HDFException- should be thrown for errors in the HDF library call, but is not yet implemented.
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DFR8setpalette
public static boolean DFR8setpalette(byte[] palette) throws HDFException- Throws:
HDFException
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DFR8writeref
public static boolean DFR8writeref(java.lang.String filename, short ref) throws HDFException- Throws:
HDFException
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SDreaddata_short
public static boolean SDreaddata_short(int sdsid, int[] start, int[] stride, int[] count, short[] theData) throws HDFException- Throws:
HDFException
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SDreaddata_int
public static boolean SDreaddata_int(int sdsid, int[] start, int[] stride, int[] count, int[] theData) throws HDFException- Throws:
HDFException
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SDreaddata_long
public static boolean SDreaddata_long(int sdsid, int[] start, int[] stride, int[] count, long[] theData) throws HDFException- Throws:
HDFException
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SDreaddata_float
public static boolean SDreaddata_float(int sdsid, int[] start, int[] stride, int[] count, float[] theData) throws HDFException- Throws:
HDFException
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SDreaddata_double
public static boolean SDreaddata_double(int sdsid, int[] start, int[] stride, int[] count, double[] theData) throws HDFException- Throws:
HDFException
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HCget_config_info
public static int HCget_config_info(int coder_type) throws HDFExceptionNew API for hdf-42r1- Throws:
HDFException
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