edit_distance_unbanded.hpp File Reference

Provides a pairwise alignment algorithm for edit distance but without band. More...

#include <algorithm>
#include <bitset>
#include <utility>
#include <range/v3/algorithm/copy.hpp>
#include <seqan3/alignment/matrix/alignment_coordinate.hpp>
#include <seqan3/alignment/matrix/alignment_trace_algorithms.hpp>
#include <seqan3/alignment/matrix/edit_distance_score_matrix_full.hpp>
#include <seqan3/alignment/matrix/edit_distance_trace_matrix_full.hpp>
#include <seqan3/alignment/pairwise/alignment_result.hpp>
#include <seqan3/alignment/pairwise/edit_distance_fwd.hpp>
#include <seqan3/core/algorithm/configuration.hpp>
#include <seqan3/range/shortcuts.hpp>
#include <seqan3/std/ranges>

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Namespaces
	seqan3
	The main SeqAn3 namespace.

Detailed Description

Provides a pairwise alignment algorithm for edit distance but without band.

Author

Marcel Ehrhardt <marcel.ehrhardt AT fu-berlin.de>