max_error_rate.hpp File Reference

Provides the configuration for maximum number of errors in percent of the query length across all error types. More...

#include <range/v3/numeric/accumulate.hpp>
#include <seqan3/core/algorithm/configuration.hpp>
#include <seqan3/core/algorithm/pipeable_config_element.hpp>
#include <seqan3/core/detail/pack_algorithm.hpp>
#include <seqan3/range/views/slice.hpp>
#include <seqan3/search/configuration/detail.hpp>
#include <seqan3/search/configuration/max_error_common.hpp>
#include <seqan3/std/algorithm>

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Classes
class	seqan3::search_cfg::max_error_rate< errors_t >
	A configuration element for the maximum number of errors in percent of the query length across all error types (mismatches, insertions, deletions). This is an upper bound of errors independent from error rates of specific error types. More...

Namespaces
	seqan3
	The main SeqAn3 namespace.
	seqan3::search_cfg
	A special sub namespace for the search configurations.

Detailed Description

Provides the configuration for maximum number of errors in percent of the query length across all error types.

Author

Christopher Pockrandt <christopher.pockrandt AT fu-berlin.de>

Rene Rahn <rene.rahn AT fu-berlin.de>