| Class | Description |
|---|---|
| HaploidIbd |
Class
HaploidIbd implements the Refined IBD algorithm. |
| Haplotype |
Class
Haplotype represents a haplotype segment. |
| HapSegment |
Class
HapSegment represents a marker interval
for a haplotype. |
| IbdBaum |
Class
IbdBaum estimates LOD scores for an IBD versus a non-IBD
model, and it estimates LOD scores for an HBD versus a non-HBD model. |
| IbdSegment |
Class
IbdSegment represents a pair of IBD haplotype segments. |
| IbsHapSegments |
Class
IbsHapSegments identifies IBS haplotype segments in
a list of sample halotype pairs. |