Uses of Class
htsjdk.samtools.SAMFileSource

Packages that use SAMFileSource

Package	Description
htsjdk.samtools

Uses of SAMFileSource in htsjdk.samtools

Methods in htsjdk.samtools that return SAMFileSource

Modifier and Type	Method and Description
SAMFileSource	SAMRecord.getFileSource() Gets the source of this SAM record -- both the reader that retrieved the record and the position on disk from whence it came.

Methods in htsjdk.samtools with parameters of type SAMFileSource

Modifier and Type	Method and Description
protected void	SAMRecord.setFileSource(SAMFileSource fileSource) Sets a marker providing the source reader for this file and the position in the file from which the read originated.