Uses of Class
htsjdk.samtools.SAMReadGroupRecord

Packages that use SAMReadGroupRecord

Package	Description
htsjdk.samtools

Uses of SAMReadGroupRecord in htsjdk.samtools

Methods in htsjdk.samtools that return SAMReadGroupRecord

Modifier and Type	Method and Description
SAMReadGroupRecord	SAMRecord.getReadGroup() Get the SAMReadGroupRecord for this SAMRecord.
SAMReadGroupRecord	SAMFileHeader.getReadGroup(java.lang.String name) Look up read group record by name.

Methods in htsjdk.samtools that return types with arguments of type SAMReadGroupRecord

Modifier and Type	Method and Description
java.util.List<SAMReadGroupRecord>	SAMFileHeader.getReadGroups()

Methods in htsjdk.samtools with parameters of type SAMReadGroupRecord

Modifier and Type	Method and Description
void	SAMFileHeader.addReadGroup(SAMReadGroupRecord readGroup)
boolean	SAMReadGroupRecord.equivalent(SAMReadGroupRecord that)
void	SAMRecordSetBuilder.setReadGroup(SAMReadGroupRecord readGroup)

Method parameters in htsjdk.samtools with type arguments of type SAMReadGroupRecord

Modifier and Type	Method and Description
void	SAMFileHeader.setReadGroups(java.util.List<SAMReadGroupRecord> readGroups) Replace entire list of read groups.

Constructors in htsjdk.samtools with parameters of type SAMReadGroupRecord

Constructor and Description
SAMReadGroupRecord(java.lang.String id, SAMReadGroupRecord srcProgramRecord)