| Package | Description |
|---|---|
| htsjdk.samtools |
| Modifier and Type | Method and Description |
|---|---|
SAMValidationError.Type |
SAMValidationError.getType() |
static SAMValidationError.Type |
SAMValidationError.Type.valueOf(java.lang.String name)
Returns the enum constant of this type with the specified name.
|
static SAMValidationError.Type[] |
SAMValidationError.Type.values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
| Modifier and Type | Method and Description |
|---|---|
void |
SamFileValidator.setErrorsToIgnore(java.util.Collection<SAMValidationError.Type> types)
Sets one or more error types that should not be reported on.
|
| Constructor and Description |
|---|
SAMValidationError(SAMValidationError.Type type,
java.lang.String message,
java.lang.String readName)
Construct a SAMValidationError with unknown record number.
|
SAMValidationError(SAMValidationError.Type type,
java.lang.String message,
java.lang.String readName,
long recordNumber)
Construct a SAMValidationError with possibly-known record number.
|