Uses of Class
htsjdk.samtools.SRAIterator.RecordRangeInfo

Packages that use SRAIterator.RecordRangeInfo

Package	Description
htsjdk.samtools
htsjdk.samtools.sra

Uses of SRAIterator.RecordRangeInfo in htsjdk.samtools

Methods in htsjdk.samtools that return SRAIterator.RecordRangeInfo

Modifier and Type	Method and Description
protected SRAIterator.RecordRangeInfo	SRAFileReader.getRecordsRangeInfo()
static SRAIterator.RecordRangeInfo	SRAIterator.getRecordsRangeInfo(ngs.ReadCollection run) Loads record ranges needed for emulating BAM index

Constructors in htsjdk.samtools with parameters of type SRAIterator.RecordRangeInfo

Constructor and Description
SRAIndex(SAMFileHeader header, SRAIterator.RecordRangeInfo recordRangeInfo)
SRAIterator(SRAAccession accession, ngs.ReadCollection run, SAMFileHeader header, ReferenceCache cachedReferences, SRAIterator.RecordRangeInfo recordRangeInfo, java.util.List<Chunk> chunks)

Uses of SRAIterator.RecordRangeInfo in htsjdk.samtools.sra

Constructors in htsjdk.samtools.sra with parameters of type SRAIterator.RecordRangeInfo

Constructor and Description
SRAAlignmentIterator(SRAAccession accession, ngs.ReadCollection run, SAMFileHeader header, ReferenceCache cachedReferences, SRAIterator.RecordRangeInfo recordRangeInfo, Chunk chunk)
SRAUnalignmentIterator(SRAAccession accession, ngs.ReadCollection run, SAMFileHeader header, SRAIterator.RecordRangeInfo recordRangeInfo, Chunk chunk)