Uses of Package
htsjdk.samtools.cram.encoding

Packages that use htsjdk.samtools.cram.encoding

Package	Description
htsjdk.samtools.cram.build
htsjdk.samtools.cram.encoding
htsjdk.samtools.cram.encoding.huffman.codec
htsjdk.samtools.cram.encoding.reader
htsjdk.samtools.cram.encoding.writer
htsjdk.samtools.cram.structure

Classes in htsjdk.samtools.cram.encoding used by htsjdk.samtools.cram.build

Class and Description
Encoding An interface to describe how a data series is encoded.

Classes in htsjdk.samtools.cram.encoding used by htsjdk.samtools.cram.encoding

Class and Description
AbstractBitCodec
BitCodec An interface that defines requirements for serializing/deserializing objects into and from a bit stream.
DataSeriesType Data series types known to CRAM.
Encoding An interface to describe how a data series is encoded.
ExternalCompressor

Classes in htsjdk.samtools.cram.encoding used by htsjdk.samtools.cram.encoding.huffman.codec

Class and Description
BitCodec An interface that defines requirements for serializing/deserializing objects into and from a bit stream.
Encoding An interface to describe how a data series is encoded.

Classes in htsjdk.samtools.cram.encoding used by htsjdk.samtools.cram.encoding.reader

Class and Description
DataSeries An annotation to denote a data series field in a java class.
DataSeriesMap

Classes in htsjdk.samtools.cram.encoding used by htsjdk.samtools.cram.encoding.writer

Class and Description
DataSeries An annotation to denote a data series field in a java class.
DataSeriesMap

Classes in htsjdk.samtools.cram.encoding used by htsjdk.samtools.cram.structure

Class and Description
ExternalCompressor