Uses of Class
htsjdk.samtools.cram.encoding.reader.AbstractReader

Packages that use AbstractReader

Package	Description
htsjdk.samtools.cram.encoding.reader

Uses of AbstractReader in htsjdk.samtools.cram.encoding.reader

Subclasses of AbstractReader in htsjdk.samtools.cram.encoding.reader

Modifier and Type	Class and Description
class	CramRecordReader

Methods in htsjdk.samtools.cram.encoding.reader that return AbstractReader

Modifier and Type	Method and Description
AbstractReader	DataReaderFactory.buildReader(AbstractReader reader, BitInputStream bitInputStream, java.util.Map<java.lang.Integer,java.io.InputStream> inputMap, CompressionHeader header, int refId)

Methods in htsjdk.samtools.cram.encoding.reader with parameters of type AbstractReader

Modifier and Type	Method and Description
AbstractReader	DataReaderFactory.buildReader(AbstractReader reader, BitInputStream bitInputStream, java.util.Map<java.lang.Integer,java.io.InputStream> inputMap, CompressionHeader header, int refId)