Uses of Class
htsjdk.samtools.sra.ReferenceCache

Packages that use ReferenceCache

Package	Description
htsjdk.samtools
htsjdk.samtools.sra

Uses of ReferenceCache in htsjdk.samtools

Constructors in htsjdk.samtools with parameters of type ReferenceCache

Constructor and Description
SRAIterator(SRAAccession accession, ngs.ReadCollection run, SAMFileHeader header, ReferenceCache cachedReferences, SRAIterator.RecordRangeInfo recordRangeInfo, java.util.List<Chunk> chunks)

Uses of ReferenceCache in htsjdk.samtools.sra

Constructors in htsjdk.samtools.sra with parameters of type ReferenceCache

Constructor and Description
SRAAlignmentIterator(SRAAccession accession, ngs.ReadCollection run, SAMFileHeader header, ReferenceCache cachedReferences, SRAIterator.RecordRangeInfo recordRangeInfo, Chunk chunk)