Uses of Interface
htsjdk.samtools.util.LineReader

Packages that use LineReader

Package	Description
htsjdk.samtools
htsjdk.samtools.util

Uses of LineReader in htsjdk.samtools

Methods in htsjdk.samtools with parameters of type LineReader

Modifier and Type	Method and Description
SAMFileHeader	SAMTextHeaderCodec.decode(LineReader reader, java.lang.String source) Reads text SAM header and converts to a SAMFileHeader object.

Uses of LineReader in htsjdk.samtools.util

Classes in htsjdk.samtools.util that implement LineReader

Modifier and Type	Class and Description
class	BufferedLineReader Implementation of LineReader that is a thin wrapper around BufferedReader.
class	StringLineReader Implementation of LineReader that gets its input from a String.