| Package | Description |
|---|---|
| htsjdk.tribble.index | |
| htsjdk.tribble.index.interval | |
| htsjdk.tribble.index.linear |
| Modifier and Type | Class and Description |
|---|---|
class |
AbstractIndex
An abstract implementation of the index class.
|
| Modifier and Type | Class and Description |
|---|---|
class |
IntervalTreeIndex
Index based on an interval tree
|
| Modifier and Type | Class and Description |
|---|---|
class |
LinearIndex
Index defined by dividing the genome by chromosome, then each chromosome into bins of fixed width (in
genomic coordinates).
|