| Package | Description |
|---|---|
| htsjdk.tribble | |
| htsjdk.tribble.bed | |
| htsjdk.tribble.example | |
| htsjdk.tribble.gelitext | |
| htsjdk.tribble.readers | |
| htsjdk.variant.bcf2 | |
| htsjdk.variant.vcf |
| Class and Description |
|---|
| LineIterator
A very simple descriptor for line-iterables.
|
| PositionalBufferedStream
A wrapper around an
InputStream which performs it's own buffering, and keeps track of the position. |
| Class and Description |
|---|
| LineIterator
A very simple descriptor for line-iterables.
|
| Class and Description |
|---|
| LineIterator
A very simple descriptor for line-iterables.
|
| PositionalBufferedStream
A wrapper around an
InputStream which performs it's own buffering, and keeps track of the position. |
| Class and Description |
|---|
| LineIterator
A very simple descriptor for line-iterables.
|
| Class and Description |
|---|
| AsciiLineReader
A simple class that provides
AsciiLineReader.readLine() functionality around a PositionalBufferedStream
BufferedReader and its BufferedReader.readLine() method should be used in preference to this class (when the
LocationAware functionality is not required) because it offers greater performance. |
| LineIterator
A very simple descriptor for line-iterables.
|
| LineReader
Interface for line-oriented readers.
|
| LineReaderUtil.LineReaderOption |
| Positional
Minimal interface for an object at support getting the current position in the stream / writer / file, as well as a handful of other
reader-like features.
|
| PositionalBufferedStream
A wrapper around an
InputStream which performs it's own buffering, and keeps track of the position. |
| TabixReader.Iterator |
| TabixReader.TIndex |
| TabixReader.TPair64 |
| Class and Description |
|---|
| PositionalBufferedStream
A wrapper around an
InputStream which performs it's own buffering, and keeps track of the position. |
| Class and Description |
|---|
| LineIterator
A very simple descriptor for line-iterables.
|