Uses of Class
htsjdk.variant.variantcontext.GenotypeType

Packages that use GenotypeType

Package	Description
htsjdk.variant.variantcontext

Uses of GenotypeType in htsjdk.variant.variantcontext

Methods in htsjdk.variant.variantcontext that return GenotypeType

Modifier and Type	Method and Description
protected GenotypeType	Genotype.determineType() Internal code to determine the type of the genotype from the alleles vector
GenotypeType	Genotype.getType()
static GenotypeType	GenotypeType.valueOf(java.lang.String name) Returns the enum constant of this type with the specified name.
static GenotypeType[]	GenotypeType.values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods in htsjdk.variant.variantcontext that return types with arguments of type GenotypeType

Modifier and Type	Method and Description
java.util.EnumMap<GenotypeType,java.lang.Double>	GenotypeLikelihoods.getAsMap(boolean normalizeFromLog10)

Methods in htsjdk.variant.variantcontext with parameters of type GenotypeType

Modifier and Type	Method and Description
double	GenotypeLikelihoods.getLog10GQ(GenotypeType genotype) Deprecated.