| Package | Description |
|---|---|
| htsjdk.variant.variantcontext.writer |
| Modifier and Type | Class and Description |
|---|---|
static class |
BCF2FieldEncoder.AtomicInt
Specialized int encoder for atomic (non-list) integers
|
static class |
BCF2FieldEncoder.Flag |
static class |
BCF2FieldEncoder.Float |
static class |
BCF2FieldEncoder.GenericInts |
static class |
BCF2FieldEncoder.IntArray |
static class |
BCF2FieldEncoder.StringOrCharacter |
| Modifier and Type | Method and Description |
|---|---|
protected BCF2FieldEncoder |
BCF2FieldWriter.getFieldEncoder() |
| Constructor and Description |
|---|
BCF2FieldWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
FTGenotypesWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
GenericSiteWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
GenotypesWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
GTWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
IGFGenotypesWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder,
IntGenotypeFieldAccessors.Accessor ige) |
IntegerTypeGenotypesWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
SiteWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |
StaticallyTypeGenotypesWriter(VCFHeader header,
BCF2FieldEncoder fieldEncoder) |