| Package | Description |
|---|---|
| htsjdk.variant.variantcontext.writer |
| Class and Description |
|---|
| BCF2Encoder
See #BCFWriter for documentation on this classes role in encoding BCF2 files
|
| BCF2FieldEncoder
See #BCFWriter for documentation on this classes role in encoding BCF2 files
|
| BCF2FieldWriter
See #BCFWriter for documentation on this classes role in encoding BCF2 files
|
| BCF2FieldWriter.GenotypesWriter |
| BCF2FieldWriter.SiteWriter |
| BCF2FieldWriter.StaticallyTypeGenotypesWriter |
| IntGenotypeFieldAccessors.Accessor |
| Options
Available writer options for VariantContextWriters
|
| VariantContextWriter
this class writes VCF files
|
| VariantContextWriterBuilder |
| VariantContextWriterBuilder.OutputType |