.. _biblo:

Bibliography
============

.. Note: first letter of entries must be escaped to avoid rst parsing as enumerated list
   https://docutils.sourceforge.io/docs/ref/rst/restructuredtext.html#enumerated-lists

.. [BCSZ08]
    \W. Bruzda, V. Cappellini, H.-J. Sommers, K. Życzkowski, *Random Quantum Operations*, Phys. Lett. A **373**, 320-324 (2009). :doi:`10.1016/j.physleta.2008.11.043`.

.. [Hav03]
    \T. Havel, *Robust procedures for converting among Lindblad, Kraus and matrix representations of quantum dynamical semigroups*, J. Math. Phys. **44** 2, 534 (2003). :doi:`10.1063/1.1518555`.

.. [Wat13]
    \J. Watrous, |theory-qi|_, lecture notes.

.. [Mez07]
    \F. Mezzadri, *How to generate random matrices from the classical compact groups*, Notices of the AMS **54**, 592-604 (2007). :arxiv:`math-ph/0609050`.

.. [Moh08]
    \M. Mohseni, A. T. Rezakhani, D. A. Lidar, *Quantum-process tomography: Resource analysis of different strategies*, Phys. Rev. A **77**, 032322 (2008). :doi:`10.1103/PhysRevA.77.032322`.

.. [Gri98]
    \M. Grifoni, P. Hänggi, *Driven quantum tunneling*, Phys. Rep. **304**, 299 (1998). :doi:`10.1016/S0370-1573(98)00022-2`.

.. [Gar03]
    Gardiner and Zoller, *Quantum Noise* (Springer, 2004).

.. [Bre02]
    H.-P. Breuer and F. Petruccione, *The Theory of Open Quantum Systems* (Oxford, 2002).

.. [Coh92]
    \C. Cohen-Tannoudji, J. Dupont-Roc, G. Grynberg, *Atom-Photon Interactions: Basic Processes and Applications*, (Wiley, 1992).

.. [WBC11]
    \C. Wood, J. Biamonte, D. G. Cory, *Tensor networks and graphical calculus for open quantum systems*. :arxiv:`1111.6950`

.. [AKN98]
    \D. Aharonov, A. Kitaev, N. Nisan, *Quantum circuits with mixed states*, in Proceedings of the Thirtieth Annual ACM STOC, 20-30 (1998). :arxiv:`quant-ph/9806029`

.. [Wis09]
    \H. M. Wiseman, G. J. Milburn, *Quantum Measurement and Control*, (Cambridge University Press, 2009).

.. [Donvil22]
    \B. Donvil, P. Muratore-Ginanneschi, *Quantum trajectory framework for general time-local master equations*, Nat Commun **13**, 4140 (2022). :doi:`10.1038/s41467-022-31533-8`.

.. [Abd19]
    \M. Abdelhafez, D. I. Schuster, J. Koch, *Gradient-based optimal control of open quantum systems using quantumtrajectories and automatic differentiation*, Phys. Rev. A **99**, 052327 (2019). :doi:`10.1103/PhysRevA.99.052327`.

.. [BoFiN23]
    \N. Lambert, T. Raheja, S. Cross, P. Menczel, S. Ahmed, A. Pitchford, D. Burgarth, F. Nori, *QuTiP-BoFiN: A bosonic and fermionic numerical hierarchical-equations-of-motion library with applications in light-harvesting, quantum control, and single-molecule electronics*, Phys. Rev. Research **5**, 013181 (2023). :doi:`10.1103/PhysRevResearch.5.013181`.

.. [Lambert19]
    \N. Lambert, S. Ahmed, M. Cirio, F. Nori, *Modelling the ultra-strongly coupled spin-boson model with unphysical modes*, Nat Commun **10**, 3721 (2019). :doi:`10.1038/s41467-019-11656-1`.

.. [Kreisbeck12]
   \C. Kreisbeck, T. Kramer, *Long-Lived Electronic Coherence in Dissipative Exciton Dynamics of Light-Harvesting Complexes*, J. Phys. Chem. Lett. 3, 2828–2833 (2012). :doi:`10.1021/jz3012029`.

.. [AAA]
   \Y. Nakatsukasa, O.  Sete,  L. Trefethen, *The AAA Algorithm for Rational Approximation*, SIAM Journal on Scientific Computing, Vol. 40, Iss. 3 (2018) :doi:`10.1137/16M1106122`

.. [ESPIRAvsESPRIT]
   \N. Derevianko, G. Plonka, M. Petz, *From ESPRIT to ESPIRA: estimation of signal parameters by iterative rational approximation*, IMA Journal of Numerical Analysis (2023) :doi:`10.1093/imanum/drab108`

..  The trick with |text|_ is to get an italic link, and is described in the
    Docutils FAQ at https://docutils.sourceforge.net/FAQ.html#is-nested-inline-markup-possible.
    This is at the bottom of the source file to avoid extra whitespace.

.. |theory-qi| replace:: *Theory of Quantum Information*
.. _theory-qi: https://cs.uwaterloo.ca/~watrous/TQI-notes/
