gbwt_main.cpp File Reference

#include <omp.h>
#include <unistd.h>
#include <getopt.h>
#include <list>
#include <fstream>
#include "subcommand.hpp"
#include "../xg.hpp"
#include "../gbwt_helper.hpp"
#include <vg/io/vpkg.hpp>
#include <bdsg/overlay_helper.hpp>
#include <gbwtgraph/gbwtgraph.h>
#include <gbwtgraph/path_cover.h>

Functions
void	help_gbwt (char **argv)
int	main_gbwt (int argc, char **argv)

Detailed Description

Defines the "vg gbwt" subcommand, which wraps up access for commands we'd otherwise find in the gbwt submodule.

Function Documentation

help_gbwt()

void help_gbwt

(

char **

argv

)

main_gbwt()

int main_gbwt	(	int	argc,
		char **	argv
	)