gfa.cpp File Reference

#include "gfa.hpp"
#include <gfakluge.hpp>
#include <stPinchGraphs.h>
#include <structures/union_find.hpp>

Classes
class	vg::GFAToPinchTranslator
class	vg::PinchToVGTranslator

Namespaces
	vg

Functions
bool	vg::stPinchSegment_getBlockOrientationSafe (stPinchSegment *segment)
	Get the segment's orientation in its block (false=backward, true=forward), or true (forward) if there is no block. More...
bool	vg::gfa_to_graph (istream &in, VG *graph, bool only_perfect_match)
void	vg::graph_to_gfa (const VG *graph, ostream &out)
	Export the given VG graph to the given GFA file. More...