surjector.hpp File Reference

#include <set>
#include "alignment.hpp"
#include "aligner.hpp"
#include "vg.hpp"
#include "translator.hpp"
#include "utility.hpp"
#include <vg/vg.pb.h>
#include "multipath_alignment_graph.hpp"
#include "memoizing_graph.hpp"
#include "split_strand_graph.hpp"
#include "bdsg/hash_graph.hpp"

Classes
class	vg::Surjector

Namespaces
	vg

Detailed Description

A class to hold surjection algorithms that do lossy realignment restricted to paths in the graph